From: Michael T H. <mic...@us...> - 2004-01-10 15:05:52
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Update of /cvsroot/jmol/Jmol/src/org/openscience/jmol/viewer/managers In directory sc8-pr-cvs1:/tmp/cvs-serv32441/src/org/openscience/jmol/viewer/managers Modified Files: ModelManager.java Log Message: converted covalent table to short mar representation Index: ModelManager.java =================================================================== RCS file: /cvsroot/jmol/Jmol/src/org/openscience/jmol/viewer/managers/ModelManager.java,v retrieving revision 1.33 retrieving revision 1.34 diff -u -r1.33 -r1.34 --- ModelManager.java 10 Jan 2004 14:36:36 -0000 1.33 +++ ModelManager.java 10 Jan 2004 15:05:49 -0000 1.34 @@ -274,27 +274,27 @@ return getAtomicSymbol(atom); } - public float getVanderwaalsRadius(Atom atom) { + public short getVanderwaalsMar(Atom atom) { if (suppliesVanderwaalsRadius) { float vanderwaalsRadius = modelAdapter.getVanderwaalsRadius(atom.clientAtom); if (vanderwaalsRadius > 0) - return vanderwaalsRadius; + return (short)(vanderwaalsRadius * 1000); System.out.println("JmolClientAdapter.getVanderwaalsRadius() returned " + vanderwaalsRadius); } - return JmolConstants.vanderwaalsMars[atom.atomicNumber] / 1000f; + return JmolConstants.vanderwaalsMars[atom.atomicNumber]; } - public float getCovalentRadius(Atom atom) { + public short getCovalentMar(Atom atom) { if (suppliesCovalentRadius) { float covalentRadius = modelAdapter.getCovalentRadius(atom.clientAtom); if (covalentRadius > 0) - return covalentRadius; + return (short)(covalentRadius * 1000); System.out.println("JmolClientAdapter.getCovalentRadius() returned " + covalentRadius); } - return JmolConstants.covalentMars[atom.atomicNumber] / 1000f; + return JmolConstants.covalentMars[atom.atomicNumber]; } public String getPdbAtomRecord(Object clientAtom) { |