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From: <ha...@us...> - 2025-12-03 22:36:49
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Revision: 22687
http://sourceforge.net/p/jmol/code/22687
Author: hansonr
Date: 2025-12-03 22:36:47 +0000 (Wed, 03 Dec 2025)
Log Message:
-----------
Jmol.___JmolVersion="16.3.41" // (legacy) also 16.3.42 (swingJS)
new feature: plot SPIN
-- displays the vectors of a magCIF or spinCIF file
within a unit circle as a point group object
new feature: plot SPIN POINTGROUP
-- displays the point group of the spin group
associated with a magCIF or spinCIF file
with operations
new feature: FRAME 1.1 1.2 SPLIT
-- places two specified models side-by-side in a "split-frame" configuration
-- synchonizes rotation, as normal for frames
-- allows echo in either frame using ECHO ID ... MODEL ... to associate the
respective model
-- allows hover and clicking only on the left-hand (first-specified) model
-- allows viewing of a PLOT result along with a model:
load =1crn
cartoons only
color structure
plot quaternion difference
frame 1.1 2.1 split
(quaternion difference is a calculation of 4-dimensional helical "straightness"
that has a direct correspondance with Ramachandron values.)
Rotating the quaternion unit sphere (on the right) until a cluster
is in front provides the view down the associated helix or beta pleated sheet
(on the left). The tighter the cluster, the more "straight" the helix is.
-- compatible with stereo viewing
load $caffeine
stereo on
will look essentially the same as
load $caffeine; load append ""
stereo on
frame 1.1 2.1 SPLIT
bug fix: deleting last quaternion data frame for a model disallows any addition data frames
Modified Paths:
--------------
trunk/Jmol/src/org/jmol/viewer/Jmol.properties
Modified: trunk/Jmol/src/org/jmol/viewer/Jmol.properties
===================================================================
--- trunk/Jmol/src/org/jmol/viewer/Jmol.properties 2025-11-21 20:13:04 UTC (rev 22686)
+++ trunk/Jmol/src/org/jmol/viewer/Jmol.properties 2025-12-03 22:36:47 UTC (rev 22687)
@@ -53,8 +53,60 @@
# FEATURE REQUEST: dock/undock consoles to main window.
# TODO: allow FIXED to work with MODELKIT MINIMIZE
-Jmol.___JmolVersion="16.3.37" // (legacy) also 16.3.38 (swingJS)
+Jmol.___JmolVersion="16.3.41" // (legacy) also 16.3.42 (swingJS)
+new feature: plot SPIN
+ -- displays the vectors of a magCIF or spinCIF file
+ within a unit circle as a point group object
+
+new feature: plot SPIN POINTGROUP
+ -- displays the point group of the spin group
+ associated with a magCIF or spinCIF file
+ with operations
+
+new feature: FRAME 1.1 1.2 SPLIT
+ -- places two specified models side-by-side in a "split-frame" configuration
+ -- synchonizes rotation, as normal for frames
+ -- allows echo in either frame using ECHO ID ... MODEL ... to associate the
+ respective model
+ -- allows hover and clicking only on the left-hand (first-specified) model
+ -- allows viewing of a PLOT result along with a model:
+
+
+ load =1crn
+ cartoons only
+ color structure
+ plot quaternion difference
+ frame 1.1 2.1 split
+
+ (quaternion difference is a calculation of 4-dimensional helical "straightness"
+ that has a direct correspondance with Ramachandron values.)
+ Rotating the quaternion unit sphere (on the right) until a cluster
+ is in front provides the view down the associated helix or beta pleated sheet
+ (on the left). The tighter the cluster, the more "straight" the helix is.
+
+
+ -- compatible with stereo viewing
+
+ load $caffeine
+ stereo on
+
+ will look essentially the same as
+
+ load $caffeine; load append ""
+ stereo on
+ frame 1.1 2.1 SPLIT
+
+bug fix: deleting last quaternion data frame for a model disallows any addition data frames
+
+
+JmolVersion="16.3.39" // (legacy) also 16.3.40 (swingJS)
+
+bug fix: unitcell([10,20,30,90,90,90]) fails
+
+
+JmolVersion="16.3.37" // (legacy) also 16.3.38 (swingJS)
+
feature change: American Mineralogist Society Crystal Structure Database new target API
-- load =ams/quartz
-- was https://rruff.geo.arizona.edu/AMS/viewJmol.php?mineral=quartz&action=showcif
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