From: Amjad F. <am...@fa...> - 2013-09-08 21:36:18
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Bob, As you advised, I added the "set the platformSpeed 1" line to the applet when loading PDB file. It improved the speed considerably to a level that I am very happy with. But, I still believe, JSmol somewhat suffers from the speed issue and Jmol is noticeably much more smoother when moving structures around with your mouse. What is the long-term goal? Is JSmol eventually going to replace Jmol? Is the future about having an app that does not rely on an external Java plugin? Just some thoughts. Thank you! Amjad On Sun, Sep 8, 2013 at 4:46 PM, Amjad Farooq <am...@fa...> wrote: > Bob, > > I tried JSmol on both firefox 23 and chrome under both Fedora 15 and > Windows 7. In all cases, JSmol appeared to be much much slower than Jmol. > > How and where do I set the platform speed? Please advise accordingly. > > Thank you, > Amjad > > > > > > > On Sun, Sep 8, 2013 at 4:02 PM, Robert Hanson <ha...@st...> wrote: > >> This is on what platform? >> Did you use >> >> set platformSpeed 1? >> >> Bob >> >> >> On Sun, Sep 8, 2013 at 1:51 PM, Amjad Farooq <am...@gm...> wrote: >> >>> Hi Bob, >>> >>> Just to let you know that I tried the new version of JSmol. >>> >>> JSmol runs very slow when viewing proteins compared to Jmol. So, in >>> short, JSmol is cool if one can do all this without the need for an >>> external Java but the slow speed of JSmol is a big deterrent to using it in >>> everyday work and embedding it in an online web interface to showcase your >>> work. >>> >>> Just some feedback so that it can help you fine tune it further. >>> >>> Thank you for all your time and effort. We appreciate that very much. >>> >>> Regards, >>> Amjad >>> >>> >>> *************************************************************************************************************************************************** >>> *AMJAD FAROOQ PhD DIC | Associate Professor* >>> Dept of Biochemistry & Molecular Biology | Miller School of Medicine | >>> University of Miami | Miami | FL 33136 >>> Located @ Gautier Building #217 | Mail @ 1011 NW 15th Street #217, >>> Miami , FL 33136 >>> am...@fa... | off 305-243-2429 | lab 305-243-9799 | fax >>> 305-243-3955 | www.farooqlab.net >>> >>> *************************************************************************************************************************************************** >>> >>> >>> ------------------------------------------------------------------------------ >>> Learn the latest--Visual Studio 2012, SharePoint 2013, SQL 2012, more! >>> Discover the easy way to master current and previous Microsoft >>> technologies >>> and advance your career. Get an incredible 1,500+ hours of step-by-step >>> tutorial videos with LearnDevNow. Subscribe today and save! >>> >>> http://pubads.g.doubleclick.net/gampad/clk?id=58041391&iu=/4140/ostg.clktrk >>> _______________________________________________ >>> Jmol-users mailing list >>> Jmo...@li... >>> https://lists.sourceforge.net/lists/listinfo/jmol-users >>> >>> >> >> >> -- >> Robert M. Hanson >> Larson-Anderson Professor of Chemistry >> St. Olaf College >> Northfield, MN >> http://www.stolaf.edu/people/hansonr >> >> >> If nature does not answer first what we want, >> it is better to take what answer we get. >> >> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 >> >> >> >> ------------------------------------------------------------------------------ >> Learn the latest--Visual Studio 2012, SharePoint 2013, SQL 2012, more! >> Discover the easy way to master current and previous Microsoft >> technologies >> and advance your career. Get an incredible 1,500+ hours of step-by-step >> tutorial videos with LearnDevNow. Subscribe today and save! >> >> http://pubads.g.doubleclick.net/gampad/clk?id=58041391&iu=/4140/ostg.clktrk >> _______________________________________________ >> Jmol-users mailing list >> Jmo...@li... >> https://lists.sourceforge.net/lists/listinfo/jmol-users >> >> > |