From: Paul P. <pau...@ac...> - 2013-09-08 17:35:01
|
Not exactly the subject, but when downloading a pdb file from RCSB website, the server checks if the browser accepts compressions and compress the pdb file on the file. You don't have to explicitly request a pdb.gz file to get the benefits from data compression. Paul Le 8 sept. 2013 à 08:25, Geoffrey Rowland a écrit : > I *think* I understand what is going on here. > > The problem appears due to inconsistencies in the way the pdb files are gzipped up > > In my jsmol /data folder: > > 1crn.pdb.gz is not actually gzipped at all, just a plain text file identical to 1crn.pdb. However, if 1crn.pdb is gzipped to make a bona fide 1crn.pdb.gz, it still works! > > 1m19.pdb.gz contains 1M19.pdb. Note the uppercase M. If a consistently lowercase gzip bundle is made, it works! > > 3hz7.pdb.gz contains 3hz7x.pdb. Note the extra x!. If the x is removed and the gzipped archive reconstructed, everything works! > > My local webserver, and most of my testing, has been on Fedora Linux. So, may have displayed case-sensitivity issues not occurring on Windows. > > Hope that helps someone. > > > > >On 8 September 2013 12:26, Geoffrey Rowland <row...@gm...> wrote: > Err... Actually though .pse files now work with Chrome, I am still seeing an issue with some .pdb.gz files (e.g. data/1m19.pdb.gz, data/3hz7.pdb.gz) though data/1crn.pdb.gz still works! > > Forgot the RCSB links were now using .pdb rather than .pdb.gz and can't easily check against the Stolaf server as jsmol.htm does not have any .pdb.gz links. > > Anyway, not a 'show stopper' as can use the .pdb files instead. > > Cheers > > > > ------------------------------------------------------------------------------ > Learn the latest--Visual Studio 2012, SharePoint 2013, SQL 2012, more! > Discover the easy way to master current and previous Microsoft technologies > and advance your career. Get an incredible 1,500+ hours of step-by-step > tutorial videos with LearnDevNow. Subscribe today and save! > http://pubads.g.doubleclick.net/gampad/clk?id=58041391&iu=/4140/ostg.clktrk_______________________________________________ > Jmol-users mailing list > Jmo...@li... > https://lists.sourceforge.net/lists/listinfo/jmol-users |