From: Robert H. <ha...@st...> - 2013-05-31 21:04:16
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In other words, it's Joules. If the charges in the file are in atomic units (multiple of electron charge) and the distances are measured in angstroms the Jmol calculated values of electrostatic potential can be converted into kcal/mol by multiplying by 332. > > I think that is what Jmol does with Spartan files. > OK. If you want to visualize those colors in kcal/mol, then what you would do is to pre-multiply the partial charges by that constant {*}.partialCharge = {*}.partialCharge.all.mul(332.0637) Are you saying there is something special Jmol does with partial charges with Spartan files? I don't think so... Bob > PM > > > ------------------------------------------------------------------------------ > Get 100% visibility into Java/.NET code with AppDynamics Lite > It's a free troubleshooting tool designed for production > Get down to code-level detail for bottlenecks, with <2% overhead. > Download for free and get started troubleshooting in minutes. > http://p.sf.net/sfu/appdyn_d2d_ap2 > _______________________________________________ > Jmol-users mailing list > Jmo...@li... > https://lists.sourceforge.net/lists/listinfo/jmol-users > > -- Robert M. Hanson Larson-Anderson Professor of Chemistry Chair, Chemistry Department St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 |