From: <ha...@us...> - 2013-03-31 22:53:20
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Revision: 18037 http://sourceforge.net/p/jmol/code/18037 Author: hansonr Date: 2013-03-31 22:53:17 +0000 (Sun, 31 Mar 2013) Log Message: ----------- ___version=13.0.14 bug fix: JVXL 1.0 format reading broken bug fix: MOL2 reader not properly assigning element symbols bug fix: isosurface slab translucent broken when saved in state bug fix: isosurface slab translucent mesh broken when saved in state bug fix: sync socket connections not working bug fix: WRITE PNGJ does not allow sizing of image bug fix: backbone/spine defs do not take into account phosphorylated proteins. Better: "@backbone protein&(_a>=1&_a<6|_a>=64&_a<72)|nucleic&(_a>=6&_a<14|_a>=72)", "@spine protein&_a>=1&_a<4|nucleic&_a>=6&_a<14&_a!=12", bug fix: getProperty fileInfo fixed and documented bug fix: assign atom does not update selections for elements bug fix: LcaoCartoon "-sp3d" not working bug fix: incorrect calculation of RMSD for COMPARE and SMILES bug fix: ModelKit menu "SHIFT to rotate" should read "ALT to rotate" Modified Paths: -------------- branches/v13_0/Jmol/src/org/jmol/jvxl/readers/JvxlReader.java branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties Modified: branches/v13_0/Jmol/src/org/jmol/jvxl/readers/JvxlReader.java =================================================================== --- branches/v13_0/Jmol/src/org/jmol/jvxl/readers/JvxlReader.java 2013-03-31 22:43:11 UTC (rev 18036) +++ branches/v13_0/Jmol/src/org/jmol/jvxl/readers/JvxlReader.java 2013-03-31 22:53:17 UTC (rev 18037) @@ -82,9 +82,9 @@ readVoxelVector(0); readVoxelVector(1); readVoxelVector(2); - skipComments(true); for (int i = 0; i < atomCount; ++i) jvxlFileHeaderBuffer.append(readLine() + "\n"); + skipComments(true); Logger.info("Reading extra JVXL information line: " + line); nSurfaces = parseInt(line); if (!(isJvxl = (nSurfaces < 0))) Modified: branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties =================================================================== --- branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-03-31 22:43:11 UTC (rev 18036) +++ branches/v13_0/Jmol/src/org/jmol/viewer/Jmol.properties 2013-03-31 22:53:17 UTC (rev 18037) @@ -9,8 +9,9 @@ # Don't use ___ in your text, as that is the key for stripping out # the information saved in the JAR version of this file. -___version=13.0.14_hold +___version=13.0.14 +bug fix: JVXL 1.0 format reading broken bug fix: MOL2 reader not properly assigning element symbols bug fix: isosurface slab translucent broken when saved in state bug fix: isosurface slab translucent mesh broken when saved in state This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |