Menu
▾
▴
Re: [Jmol-developers] atomCount vs nodes.length
|
From: N D. B. <hu...@gm...> - 2013-02-06 23:37:02
|
Hmm if I don't use loadInline then I can't immediately retrieve the molecule from the viewer. Is there a callback mechanism for the loading method you recommended, or a way to sleep the current thread until that thread has completed? David On 6 February 2013 23:28, N David Brown <hu...@gm...> wrote: Sorry - mol is a JmolMolecule instance retrieved from a Viewer instance > like so: myViewer.getModelSet().getMolecules[i]. > > Thanks for the tip Bob. So if I call a load command of that format using > AppConsole#execute it will be thread-safe? > > David > > On 6 February 2013 22:52, Robert Hanson <ha...@st...> wrote: > >> I have no idea. What's "mol" ? >> >> By the way, loadInLine is not thread-safe. It is much better to use a >> script and just enter the data as: >> >> load DATA "model mydata" >> .....mol data here... >> end "model mydata" .... more load parameters here.... >> >> >> >> On Wed, Feb 6, 2013 at 4:17 PM, N David Brown <hu...@gm...> wrote: >> >>> After importing a structure of N atoms from molfile format using >>> Viewer#loadInline: >>> >>> System.out.println(mol.atomCount); // 0 >>> System.out.println(mol.nodes.length); // N >>> >>> Why is atomCount zero? >>> >>> David >>> >>> >>> ------------------------------------------------------------------------------ >>> Free Next-Gen Firewall Hardware Offer >>> Buy your Sophos next-gen firewall before the end March 2013 >>> and get the hardware for free! Learn more. >>> http://p.sf.net/sfu/sophos-d2d-feb >>> _______________________________________________ >>> Jmol-developers mailing list >>> Jmo...@li... >>> https://lists.sourceforge.net/lists/listinfo/jmol-developers >>> >>> >> >> >> -- >> Robert M. Hanson >> Larson-Anderson Professor of Chemistry >> Chair, Chemistry Department >> St. Olaf College >> Northfield, MN >> http://www.stolaf.edu/people/hansonr >> >> >> If nature does not answer first what we want, >> it is better to take what answer we get. >> >> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 >> >> > |