Re: [Jmol-users] Save coordinates through Jmol Applet

[A. H. <ang...@ua...>]

Hello, Martin

The syntax has never been write("whatever"). It's   

  write <optional format specification> <filename>

if you omit the format spec (1st parameter), Jmol will guess from the 
filename extension. That's why you are getting JPGs, I think; it 
didn't understand pqr.
I think that PQR format has just been added by Bob, it wasn't there 
before.

Please check the doc at
http://chemapps.stolaf.edu/jmol/docs/#writemodel

So,

  write pqr myfile.txt;
  write myfile.pqr;

should work the same