Re: [Jmol-users] add hydrogens question (and possible bug) - part 2

[Otis R. <osr...@ch...>]

Hi Paul,

I reported this for 12.1.51_dev, but I used a poorly designed email 
subject. Bob responded from the Gorden Conference, and indicated that he 
was looking at a number of problems in this version.

I stepped back to 12.1.35, and that seems OK. This problem seems to crop 
up from time to time in new versions. It looks like it's related to sp3 
carbons that come from JME with either a linear or planar geometry (i.e 
R3CH or R2CH2). Bob has fixed this on one or two other versions. I think 
he may be working on this now, but my poorly worded subject may have 
buried this one. It's good you reported it again.

Otis

Otis Rothenberger
chemagic.com


On 7/25/2011 4:30 PM, Paul Pillot wrote:
> After further testing, at Angel Herraez DIY pages : http://biomodel.uah.es/en/DIY/ ...
> I tried all the different sketchers, and they all give the same result with the 2-methylbutane : an hydrogen is missing. Same goes for C n°2 and 3 for 2,3 diméthybutane.
>
> JMEtoJmol on Otis Rothenberger's Chemagic website displays the correct molecule.
>
> -Paul
>
>
>
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