Re: [Jmol-users] show measurements as echo

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May seem to work, but it isn't a general solution. Trust me, you need to
specify models the way I showed you and use script inline.

On Fri, Apr 1, 2011 at 10:19 AM, Daniel Carbajo <dan...@gm...>wrote:

> Well it might sound strange, but what really works for me is what I send
> you, i.e.: without script inline in the function, and calling the function
> adding the curly brackets and the .ca to the php variables.
> What I cannot make work anyhow is the other way, i.e.: with script inline
> in the function, and calling the function with just the php variables and
> escaped single quotes...
> It really works...
>
>
> 2011/4/1 Robert Hanson <ha...@st...>
>
>> well, that won't work. See my previous posts.
>>
>>
>> On Fri, Apr 1, 2011 at 3:41 AM, Daniel Carbajo <dan...@gm...>wrote:
>>
>>> At the end I left it like this (without script inline):
>>>
>>> function crossMeasure(atomListN, atomListM){
>>>     set measurementUnits angstroms
>>>     set measurements 3
>>>     font measure 16 serif bold
>>>     var n = atomListM.length
>>>     for (var i = 2; i <= n; i++) {
>>>         measure @{atomListN[1]} @{atomListM[i]}
>>>     }
>>> }
>>>
>>> function DELcrossMeasure(atomListN, atomListM){
>>>
>>>     var n = atomListM.length
>>>     for (var i = 2; i <= n; i++) {
>>>          measure delete @{atomListN[1]} @{atomListM[i]}
>>>     }
>>> }
>>>
>>>
>>> And I call it like:
>>> $contenuto2 .= '<td><script>
>>>
>>> jmolCheckbox("crossMeasure({'.$select_r.'.ca},{'.$select_rmodel.'.ca})",
>>> "DELcrossMeasure({'.$select_r.'.ca},{'.$select_rmodel.'.ca})", "");
>>> </script></td></tr>';
>>>
>>>
>>> It would be nice to show the measure results anyhow, because when there
>>> are more than 2 homology models, it is hard to see the distance number (and
>>> also because I use some labels). Any way to show the measure results is ok,
>>> either as an "echo", an "alert", or in a message box like in the
>>> documentation examples. Which is the easiest way? Thanks a lot!
>>>  Daniel
>>>
>>>
>>>
>>>
>>>
>>>
>>> 2011/3/31 Robert Hanson <ha...@st...>
>>>
>>>> sure, but you wouldn't do that inside the for loop. I think you are
>>>> confusing Jmol script and JavaScript. First, let's get the crossMeasure
>>>> working. What's the final form of that that works?
>>>>
>>>>
>>>> On Thu, Mar 31, 2011 at 4:48 AM, Daniel Carbajo <
>>>> dan...@gm...> wrote:
>>>>
>>>>> Thanks Bob, but I cannot make it work as an echo; if you remember the
>>>>> function you have helped me with these last days, I want to modify it so it
>>>>> looks something like this
>>>>>
>>>>> function crossMeasure(atomListN, atomListM){
>>>>>     set measurementUnits angstroms
>>>>>     set measurements 3
>>>>>     font measure 16 serif bold
>>>>>
>>>>>     set echo top left
>>>>>     font echo 20 serif bolditalic
>>>>>     color echo green
>>>>>
>>>>>     var n = atomListM.length
>>>>>     for (var i = 2; i <= n; i++) {
>>>>>         measure @{atomListN[1]} @{atomListM[i]}
>>>>>
>>>>>         var a =
>>>>> jmolGetPropertyAsArray('measurementInfo')[0].strMeasurement
>>>>>         echo append a ????
>>>>>     }
>>>>> }
>>>>>
>>>>> Is something like that possible?
>>>>>
>>>>>
>>>>> 2011/3/31 Robert Hanson <ha...@st...>
>>>>>
>>>>>> Check this out:
>>>>>>
>>>>>>
>>>>>> jmolEvaluate('getProperty("measurementInfo")')
>>>>>>
>>>>>> this gives you the overall format of the measurementInfo data.
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> On Wed, Mar 30, 2011 at 8:46 AM, Daniel Carbajo <
>>>>>> dan...@gm...> wrote:
>>>>>>
>>>>>>> Hello everybody,
>>>>>>> does any of you know if it is possible to display the output of "show
>>>>>>> measurements" as an "echo" when using the jmol applet in a php page?
>>>>>>> Alternatively, do you know how to show a message box like in the
>>>>>>> documentation pages (like in
>>>>>>> http://chemapps.stolaf.edu/jmol/docs/examples-11/measure.htm).
>>>>>>> Or, as another alternative, how to use
>>>>>>> javascript:alert(jmolGetPropertyAsArray('measurementInfo')) which I cannot
>>>>>>> make work...
>>>>>>> Thanks a lot!
>>>>>>> Daniel
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> ------------------------------------------------------------------------------
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>>>>>>> _______________________________________________
>>>>>>> Jmol-users mailing list
>>>>>>> Jmo...@li...
>>>>>>> https://lists.sourceforge.net/lists/listinfo/jmol-users
>>>>>>>
>>>>>>>
>>>>>>
>>>>>>
>>>>>> --
>>>>>> Robert M. Hanson
>>>>>> Professor of Chemistry
>>>>>> St. Olaf College
>>>>>> 1520 St. Olaf Ave.
>>>>>> Northfield, MN 55057
>>>>>> http://www.stolaf.edu/people/hansonr
>>>>>> phone: 507-786-3107
>>>>>>
>>>>>>
>>>>>> If nature does not answer first what we want,
>>>>>> it is better to take what answer we get.
>>>>>>
>>>>>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>>>>>
>>>>>>
>>>>>> ------------------------------------------------------------------------------
>>>>>> Create and publish websites with WebMatrix
>>>>>> Use the most popular FREE web apps or write code yourself;
>>>>>> WebMatrix provides all the features you need to develop and
>>>>>> publish your website. http://p.sf.net/sfu/ms-webmatrix-sf
>>>>>>
>>>>>>
>>>>>> _______________________________________________
>>>>>> Jmol-users mailing list
>>>>>> Jmo...@li...
>>>>>> https://lists.sourceforge.net/lists/listinfo/jmol-users
>>>>>>
>>>>>>
>>>>>
>>>>>
>>>>> ------------------------------------------------------------------------------
>>>>> Create and publish websites with WebMatrix
>>>>> Use the most popular FREE web apps or write code yourself;
>>>>> WebMatrix provides all the features you need to develop and
>>>>> publish your website. http://p.sf.net/sfu/ms-webmatrix-sf
>>>>>
>>>>> _______________________________________________
>>>>> Jmol-users mailing list
>>>>> Jmo...@li...
>>>>> https://lists.sourceforge.net/lists/listinfo/jmol-users
>>>>>
>>>>>
>>>>
>>>>
>>>> --
>>>> Robert M. Hanson
>>>> Professor of Chemistry
>>>> St. Olaf College
>>>> 1520 St. Olaf Ave.
>>>> Northfield, MN 55057
>>>> http://www.stolaf.edu/people/hansonr
>>>> phone: 507-786-3107
>>>>
>>>>
>>>> If nature does not answer first what we want,
>>>> it is better to take what answer we get.
>>>>
>>>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>>>
>>>>
>>>> ------------------------------------------------------------------------------
>>>> Create and publish websites with WebMatrix
>>>> Use the most popular FREE web apps or write code yourself;
>>>> WebMatrix provides all the features you need to develop and
>>>> publish your website. http://p.sf.net/sfu/ms-webmatrix-sf
>>>>
>>>> _______________________________________________
>>>> Jmol-users mailing list
>>>> Jmo...@li...
>>>> https://lists.sourceforge.net/lists/listinfo/jmol-users
>>>>
>>>>
>>>
>>>
>>> ------------------------------------------------------------------------------
>>> Create and publish websites with WebMatrix
>>> Use the most popular FREE web apps or write code yourself;
>>> WebMatrix provides all the features you need to develop and
>>> publish your website. http://p.sf.net/sfu/ms-webmatrix-sf
>>>
>>> _______________________________________________
>>> Jmol-users mailing list
>>> Jmo...@li...
>>> https://lists.sourceforge.net/lists/listinfo/jmol-users
>>>
>>>
>>
>>
>> --
>> Robert M. Hanson
>> Professor of Chemistry
>> St. Olaf College
>> 1520 St. Olaf Ave.
>> Northfield, MN 55057
>> http://www.stolaf.edu/people/hansonr
>> phone: 507-786-3107
>>
>>
>> If nature does not answer first what we want,
>> it is better to take what answer we get.
>>
>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>
>>
>> ------------------------------------------------------------------------------
>> Create and publish websites with WebMatrix
>> Use the most popular FREE web apps or write code yourself;
>> WebMatrix provides all the features you need to develop and
>> publish your website. http://p.sf.net/sfu/ms-webmatrix-sf
>>
>> _______________________________________________
>> Jmol-users mailing list
>> Jmo...@li...
>> https://lists.sourceforge.net/lists/listinfo/jmol-users
>>
>>
>
>
> ------------------------------------------------------------------------------
> Create and publish websites with WebMatrix
> Use the most popular FREE web apps or write code yourself;
> WebMatrix provides all the features you need to develop and
> publish your website. http://p.sf.net/sfu/ms-webmatrix-sf
>
> _______________________________________________
> Jmol-users mailing list
> Jmo...@li...
> https://lists.sourceforge.net/lists/listinfo/jmol-users
>
>

-- 
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107

If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900

Re: [Jmol-users] show measurements as echo

An interactive viewer for three-dimensional chemical structures.

Re: [Jmol-users] show measurements as echo