Re: [Jmol-users] "newbie" question....load from script

[A. H. <ang...@ua...>]

Hi again Tom. (Sorry to be late, the time shift)

1.- Everything in your page (using the files you sent me off-list) works OK here in local 
mode, so the problem as Bob advised must be specific to serving files from the web server.
Those of us who started with Chime before Jmol have got into the habit of using SPT 
extension for scripts, so we didn't find this before. Of course, you can use any extension as 
you wish, but it seems that no extension is dangerous.

2.- Isosurfaces: you should give a name to both, to avoid trouble. In addition, it seems that 
when you have several frames you must select each  frame before generating the 
isosurface. This is discussed here:
http://www.mail-archive.com/jmo...@li.../msg08941.html
and I have just tried a modification of your surfaces_AZ.script file that does indeed work, 
generating both isosurfaces:

frame 1;
select *:A;
isosurface prA ignore(*:Z or solvent) resolution 0 molecular translucent;

frame 2;
select *:Z;
isosurface ligZ ignore(protein or solvent) resolution 0 color green molecular translucent;