[Jmol-users] Adding Hydrogens

[Frederik H. <F....@we...>]

Hi,

I found nothing about my problem in the documentation, so i dare asking here.
Is there a way to add Hydrogens to a PDB-Structure in Jmol like there is in 
Pymol with H_add() ? 
And is there a way to extract the molecule into my Java environment, so i 
can work with it in my applet? I want to compute and show some Surface 
descriptors which need those Hydrogens. 

The best thing would be if i could open a Structure directly from the PDB, 
add those hydrogens, perform some calculation and show it in the Jmol 
window with cool Grafix and all the stuff Jmol can do like showing only the
cartoon view so i can show how the binding pocket contains some dummy
atoms/spheres that i place there. 

Would be nice if someone answered me and helped me out with this one.

thanks in advance
Frederik Hefke
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