From: <jm...@da...> - 2006-06-15 10:38:37
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(relates to 10.x) Bob, I've tested all the operations I need and any others I can think of, and it works very well. Thank you, I'm impressed by the quick work and I hope it benefits other users too. One more suggestion is for measurements across frames. If 'set measureAllModels ON' is on, currently measure (atomno=1 and */1) (atomno=1 and */2) does nothing (I think). I think it might be nice if it created a measurement between atom 1 in frame 1 and atom 1 in all other frames, so you could immediately track the motion of an atom across all frames. Not essential for anything I'm doing myself, just a thought for others to comment on. Thanks again, Dave On Wed, 14 Jun 2006 16:53:00 -0500, "Bob Hanson" <ha...@st...> said: > Dave, > > OK, this should all be in 10.x.13 Whew! That took longer than I had > imagined it would. What was meant to be a minor addition turned out to > be a full rewrite of the measurement code. But it is MUCH more flexible > now, and I think you will like it. Your suggested improvements are all > absolutely excellent. I really like > > set measureAllModels > > and the ability to create and delete measurements like that for all > models. This HAS to be useful! > > > jm...@da... wrote: > > >set showMeasurements only toggles the the distance/angle labels > >not the lines. > > > Well, not quite. I know, it's confusing: > > set measurements off # turn off label only; leave the line > set showMeasurements off #turn off label and line > > the latter works in 10.2 but is broken in 10.3 (probably my fault) > > To 10.x.13 I've added: > > set measurementNumbers ON/OFF > #as a preferred equivalent to "set measures ON/OFF" (left in for > compatibility) > #does not persist through file loading (by the way) > > set showMeasurements ON/OFF > #as before; DOES persist through file loading (by the way) > > and new: > > measurements OFF # doesn't delete measurements; just hides them. > measurements DELETE # this does delete them > measurements ON # turns them back on if they are off > > Along with this update comes something I've been meaning to add for some > time: > > measure ALLCONNECTED (carbon) (oxygen) > > As an alternative to using a range: > > measure 1.0 2.0 (carbon) (oxygen) > > to good effect. > > Since now we have a distinction between "OFF" and "DELETE" we also have > the capability to turn on and off SELECTED measurements. So, for > example, you can say: > > measure OFF ALL (carbon) (oxygen) > > measures DELETE 1.2 1.5 (carbon) (oxygen) > > I do NOT recommend: > > set measureAllModels; measure ALL (*) (*) > > > Please check it out and see if this does what you want. I've put up a > test page at > > http://www.stolaf.edu/people/hansonr/jmol/test/proto/measure.htm > > that I THINK tests just about everything conceivable. > > > > > >The measurement table in Jmol.jar is broken, as deletions carried > >out in scripts or from the viewer are not seen in the table, > >which then becomes unuseable. > > > I meant to say, "with my latest fixes" > > > > >The measurement tick boxes in the viewer popup, and the application > >menu are broken. > > > > > not any more. > > >As a feature request, I would like deletions of measurements when > >'set MeasurementAllModels ON' is on to be propagated across all models. > > > > > done. > > > Bob > > > > _______________________________________________ > Jmol-developers mailing list > Jmo...@li... > https://lists.sourceforge.net/lists/listinfo/jmol-developers -- Dave Evans da...@fa... http://www.davidaevans.org |