Re: [Jmol-users] Jmol prerelease 10.00.55

[Miguel <mi...@jm...>]

Jan wrote:

> not a script, but while interacting with 1ton, cartoon; dots; wireframe=
;
> connect modify double (oxygen and bondcount=3D1) (carbon); during mouse=

> rotate:
> Exception in thread =22AWT-EventQueue-0=22
> java.lang.ArrayIndexOutOfBoundsException: 188856
>     at org.jmol.g3d.Graphics3D.plotPixelsClipped(Graphics3D.java:1260)
>     at
> org.jmol.g3d.Circle3D.plot8FilledCircleCenteredClipped(Circle3D.java:13=
3)
>     at
> org.jmol.g3d.Circle3D.plotFilledCircleCenteredClipped(Circle3D.java:163=
)
> ...
>
> I could reproduce with:
> load pdb 1ton.pdb;cartoon; dots; wireframe; connect modify double
> (oxygen and bondcount=3D1) (carbon);set display selected;cpk off;dots o=
ff;
> and rotated and zoomed that a bit with the mouse.

Excellent. The problem occured with 'halos'.

The key part of this was 'set display selected'. Turning off spacefill an=
d
reducing to 'wireframe on' also helped.

I think this bug has been lurking there ever since 'translucent' was
introduced.

I have checked in the fix.


Miguel