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Re: [Jmol-users] Loading an pdb file from a url
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From: <ha...@st...> - 2006-01-09 12:54:00
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Tjaart, please do let us know what solution you arrive at for this. I think you can use the signed applet to do this -- Does anyone have a working example of that? An additional alternative is quite simple. 1) Add the following to your web page in the <head> section: <script type="text/javascript" src="http://fusion.stolaf.edu/chemistry/jmol/loaddata.js"></script> 2) Create an applet on your page anyway you want. 3) Add a link such as the following, or run that command as part of the document body "onload" method: <a href="javascript:retrieveModel('1crn')">1crn</a> or <body onload="retrieveModel('1crn')"> (for example) You can substitute anything you want for "1crn" there -- if it's just four digits, it retreives the Protein Data Bank file; if it is a full url, starting with http://, then it gets that file. If you want to give the user full control over what to load, use getModel() instead of retrieveModel(). See http://fusion.stolaf.edu/chemistry/jmol/loaddata.htm for an example. The only catch is that it's a bit indirect, as it uses our server here at St. Olaf College to do the transfer. Bob Hanson > Hi > > I am a newbie tryinh to developing pages with javascript. I am trying to > enable a user to load any pdb file (from the PDB) into Jmol from a > webpage. I have tried using the following: > > jmolApplet(600, "load http://www.pdb.org/pdb/files/1tx2.pdb"); > > without any success. It gives me an error saying "bad URL" but if I open > up the link in Firefox I see the physical pdb file. > > The idea is to allow the user to type in a pdb file code which will then > be automatically loaded. Any ideas? > > Thanks for any suggestions! > -- > Tjaart de Beer > University of Pretoria > Lynwood rd > Pretoria > South Africa > 0001 > > Email: tj...@tu... > td...@gm... > > --------- > The software required "Windows XP or better" ... so I installed Linux > > > ------------------------------------------------------- > This SF.net email is sponsored by: Splunk Inc. Do you grep through log > files > for problems? Stop! Download the new AJAX search engine that makes > searching your log files as easy as surfing the web. DOWNLOAD SPLUNK! > http://ads.osdn.com/?ad_id=7637&alloc_id=16865&op=click > _______________________________________________ > Jmol-users mailing list > Jmo...@li... > https://lists.sourceforge.net/lists/listinfo/jmol-users > |