Re: [Jmol-users] Reserved words (e.g. NO)

[Miguel <mi...@jm...>]

>> I have removed 'yes' and 'no' from the list of keywords.

Rolf,

> I think this is a more general problem.

I completely agree.

I am trying to think of a more general solution that can be fit into the
existing script compiler/interpreter.

I am trying to avoid a major redesign/rewrite of the script interpreter
because it would be a *lot* of work and it would introduce *many* bugs.

> I parsed all PDB entries and
> tried to use all 5888 different hetero component
> names in a selection
> command (e.g.: select =5BEBP=5D21;).
>
> I can't tell you all problematic names, because jmol interrupts a scrip=
t
> on error and it would be too tedious to find every one step by step.

In this particular context, I believe that the problem set is:

  all of the tokens containing <=3D 3 alpha-numeric characters

> Some of the problematic names are =22ON=22,=22ALL=22,=22SET=22. The com=
plete list of
> hetero component names is available at
> =22http://www.imb-jena.de/ImgLibPDB/pages/hetDir/scan_pdb_het.txt=22.

Yes

> Since we want to render all hetero components at the =22IMB Jena Image
> Library of Biological Macromolecules=22
> (http://www.imb-jena.de/IMAGE.html) in a specific way and we are
> currently extending the integration of Jmol at our site it would be
> important for us to be able to select all hetero components without
> trouble.

I can appreciate that.

I will see what I can do.


Miguel