Re: [Jmol-developers] Initial .cube file isosurface support

[Miguel <mi...@jm...>]

> This is demo page for this cvs snapshot.
>
> http://chemie.skku.ac.kr/=7Ewkpark/demos/demo/sample2.html
>
> Great=21=21

Very nice.

Comments/Questions:

With 4 on one page it takes a while to load.

3 of the files are compressed ... but o2h2_1_06.cube is not. It would
benefit from compression.

I see that you are using a separate .pdb file to define the molecules. Yo=
u
could use the .cube.gz files themselves, but performance would probably b=
e
worse ... because the files would get downloaded twice.

Q: Why are you using the signed applet?

Q: Why did you choose not to use the Jmol.js JavaScript library?


> and... is there any regenerate/replace or delete isosurface command ?

If you use the same name in another isosurface command then the old one
will be thrown away:

isosurface plus 0.05 =22file.cube=22
...
isosurface plus 0.01 =22file.cube=22

You can also turn off a particular surface

  isosurface plus off

For fast response I think it is best if you load all the surfaces that yo=
u
are going to use, with different names, and then then turn them on and
off.

Q: Is there any reason why someone would want to delete a surface instead=

of turning it off?


Miguel