Re: [Jmol-developers] set picking * behavior

[Bob H. <ha...@st...>]

Miguel, did you ever get it set so that vibration animation magnitude and 
vibration vector length were decoupled? (So one might set longer arrows and 
smaller amount of motion?)

Bob


Miguel wrote:

>>Miguel, can you give specifics here? I have:
>>
>>set picking --not implemented
>>
>>What is "set picking" and what are the options?
>>
>>Bob
> 
> 
> set picking is from RasMol (& therefore Chime)
> 
> It controls mouse selection behavior.
> 
> It is hard to describe. Open the console, try the various 'set picking'
> modes, click on the atoms, and look at the output.
> 
> set picking on
> set picking ident
>   the default picking, which returns atom identification
>   information when the user clicks on an atom
> 
> set picking off
>   turns off atom identificaction information
> 
> set picking distance
>   measures distance between 2 atoms
> 
> set picking angle
>   measures angle between 3 atoms
> 
> set picking torsion
>   measures torsion angle between 4 atoms
> 
> set picking label
>   toggles labels off/on
> 
> set picking center
>   sets center of rotation to be selected atom
>   (As I recall, the way that Jmol implements
>    center-of-rotation is different from RasMol/Chime)
> 
> set picking select atom
> set picking atom
>   toggles atom selection
>   note that the atom set is *not* automatically cleared
>   in most cases, what the script writer will want is
>   select none; set display selected; set picking select atom
> 
> set picking select group
> set picking group
>   same animal, but at the group level
> 
> set picking select chain
> set picking chain
>   same animal, but at the chain level
> 
> Note that for group and chain, if the entire group/chain is not selected,
> then the first click will be to select all the atoms in the group/chain.
> If all atoms in the group/chain are selected, then clicking will toggle
> off.
> 
> 
> Miguel
> 
> 
> 
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-- 
Robert M. Hanson, ha...@st..., 507-646-3107
Professor of Chemistry, St. Olaf College 1520 St. Olaf Ave., Northfield, MN 55057
mailto:ha...@st... http://www.stolaf.edu/people/hansonr