Re: [Jmol-users] Set hydrogen on/off using script editor

[Frieda S. R. <fr...@ns...>]

Manish,

First use the select command as detailed at the page Tim referred you=20
to:
>> http://www.stolaf.edu/people/hansonr/jmol/docs/

Then follow it with a rendering command such as spacefill, also=20
detailed at the URL above.

It might be a good idea to take a look at the examples at the jmol=20
demonstration page to see how the scripting language works:
http://jmol.sourceforge.net/demo/

Frieda

On Mar 22, 2005, at 12:59 AM, Manish Agrawal wrote:

>
> Hi Tim,
>
> Thank you very much for your help. "restrict not hydrogen" works fine
> for turning hydrogen off, but I am not able to find reverse command to
> turn hydrogen on in the document. Could you please help me with this.
>
>
>
> Thanks & Regards
> Manish Agrawal
> ma...@st...
> http://www.strandgenomics.com
> Phone: (080) 2361 1349-52/2361 8992-95
>
>> On 2005-03-22 (10:25) Manish Agrawal wrote:
>>
>>> Hi,
>>>
>>> I am trying this command to turn off display of hydrogen atoms: "set
>>> hydrogens off". It's not doing anything. Do I need to change any
>>> other display settings?
>>>
>>> The reason I am executing this command is, when I am displaying a
>>> molecule I want to display it without hydrogen.
>>>
>>
>> hi Manish,
>>
>> I don't think that syntax is correct.  try "restrict not hydrogen"
> instead.
>>
>>
>> btw, script commands are well-documented by Bob Hanson here:
>>
>> <http://www.stolaf.edu/people/hansonr/jmol/docs/>
>>
>>
>>
>> regards,
>>
>>
>> tim
>> --=20
>> Timothy Driscoll
>> molvisions - see, grasp, learn.
>> <http://www.molvisions.com/>
>> usa:north carolina:raleigh
>>
>> "Everything should be made a simple as possible, but not simpler." -
> Albert Einstein
>>
>>
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*************************************
Frieda S. Reichsman, PhD
Molecules in Motion
Interactive Molecular Structures
http://www.MoleculesInMotion.com
Shutesbury, MA
*************************************