Just_Annotate_My_Genome download

Uses an existing exonerate output or just predicted proteins (e.g. from Transdecoder or just a FASTA file) to prepare gene prediction inputs for Augustus, SNAP and geneid.
Exonerate is run (enabled via AAT) if it is not provided.
GTF file is produced to judge quality of annotation.
Sorts out high quality alignments from those that don't meet the criteria.

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License

Creative Commons Attribution Non-Commercial License V2.0

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Additional Project Details

Operating Systems

BSD, Linux

Intended Audience

Advanced End Users, Science/Research

User Interface

Command-line

Programming Language

Perl

Related Categories

Perl Bio-Informatics Software

Registered

2013-10-24

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