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From: Norwid B. <nb...@ya...> - 2021-10-14 10:18:40
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Hello, On Thu, 14 Oct 2021 11:13:55 +0200 Michael Banck <mb...@de...> wrote: > > Debian is certainly happy to run any provided test suites to make sure > that the Debian packages are compliant. This is a mantra of Debian I'm used to. It may take a bit of extra time; but when shipped, it is solid. > > > InChI trust offers to certify[1] the correct implementation for $US > > 5k pear year. Right now, I do not remember a program's manual, > > either open source (like OpenBabel, RDKit), or close source (like > > ChemDraw, Marvin) which mentions/advertises that they passed > > successfully such an audit. But maybe you, or other subscribers here? > > Are you saying Debian would have to pay 5000 USD to even access the test > suite? Or is the test suite available (where?), but just formal > certification costs that amount? > > At least in the current INCHI-1-SRC.zip download I cannot find a test > suite, which is certainly a bit weird for an aspiring industry standard. This a question InChI trust may answer. My observation is, page https://www.inchi-trust.org/downloads/ provides archive INCHI-1-TEST.zip (last time I downloaded it, the md5sum was 1e13161a1b707d17b43400a9c738e291). If unzipped, `tree` states ``` . ├── readme.txt ├── samples │ ├── Misc │ │ ├── Samples.sdf.gz │ │ └── Samples.zip │ ├── readme.txt │ ├── TechMan │ │ ├── SamplesTechMan.sdf.gz │ │ └── SamplesTechMan.zip │ └── UserGuide │ └── samples_UserGuide.zip └── test ├── inchify_InChI_TestSet.cmd ├── inchify_zzp.cmd ├── readme.txt ├── test-datasets.zip └── test-results.zip ``` Archive test-datasets.zip contains files zzp.sdf (96 entries), and InChI_TestSet.sdf (2186 entries); on occasion, these are conceptual, rather than about specific molecules you can store in a bottle. Both files are set in the v2000 dialect. Back then, only a subset of the entries provided by the larger collection were used by mine in line of ```bash ./inchi-1 test.sdf -auxnone -tabbed -key ``` with InChI trust's reference executable (cf. INCHI-1-BIN.zip) to generate a permanent record. For the intended comparison with the assignments provided by an other program, as a first check point, this constrained contribution was good enough. I only speculate InChI trust's «test suite» is much more, than this. Norwid |