IMAS is a Visual Analytics system for the discovery of knowledge in genomic information. IMAS enables genomic scientists to rapidly analyze and visualize a set of microbial genomic sequences using tools such as Glimmer, Blast, Clustal-W, Primer3.

Features

  • Zoomable User Interface -- Fast!
  • Runs analysis programs locally (Blast, Glimmer, Clustal...)
  • IMAS Blast can search NCBI nr database
  • Runs HMMPfam on local copy of Pfam data
  • Can create Blast DBs from INSDSeq XML files

Project Samples

IMAS (labeled): Gene -> AA & NT BLAST -> NT ClustalW

Project Activity

See All Activity >

Categories

Bio-Informatics, Data Visualization

License

GNU General Public License version 3.0 (GPLv3)

Follow IMAS - Genomic Analysis & Visualization

IMAS - Genomic Analysis & Visualization Web Site

Other Useful Business Software
Go from Code to Production URL in Seconds Icon
Go from Code to Production URL in Seconds

Cloud Run deploys apps in any language instantly. Scales to zero. Pay only when code runs.

Skip the Kubernetes configs. Cloud Run handles HTTPS, scaling, and infrastructure automatically. Two million requests free per month.
Start Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of IMAS - Genomic Analysis & Visualization!

Additional Project Details

Operating Systems

Mac, Windows

Languages

English

Intended Audience

Science/Research

User Interface

OpenGL, wxWidgets

Programming Language

C++

Database Environment

XML-based

Related Categories

C++ Bio-Informatics Software, C++ Data Visualization Software

Registered

2009-10-09
Report inappropriate content