Download
Our source code is now on GitHub: https://github.com/hci-gnomex/gnomex. Please refer to GitHub for the latest code.
GNomEx is Genomic LIMS and Data Repository. It holds annotated experiments and downstream analysis and serves data tracks to popular genome browsers such as IGB, IGV, and UCSC genome browser. The LIMS handles all aspects of the experiment from order through results delivery. Experiment platforms supported include Illumina HiSeq, MiSeq, iScan, ABI Sanger sequencing, Affy and Agilent Microarrays, Sequenom MassArray and Bioanalyzer.
GNomEx is a web application with a Flash client user interface and a Java backend that runs on Apache Tomcat. MySQL is used for the database, although any modern RDBMS can be used.
Features
- Configurable for many different sequencing and experiment platforms
- Support for multiple core facilities
- Automated billing/customer notifications
- Configurable annotations for experiments, samples, or analyses
- Built in ABI file viewer
Project Samples
Follow GNomEx
Other Useful Business Software
Build Securely on Azure with Proven Frameworks
Moving to the cloud brings new challenges. How can you manage a larger attack surface while ensuring great network performance? Turn to Fortinet’s Tested Reference Architectures, blueprints for designing and securing cloud environments built by cybersecurity experts. Learn more and explore use cases in this white paper.
Rate This Project
Login To Rate This Project
User Reviews
-
Excellent! Easy to use.
-
Very good Software.
-
Thanks for Gnomex, it's excellent!
-
very good project, thanks!