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#17 problem with maxfeature

closed
Gbrowse (14)
5
2006-09-08
2006-02-20
deepak
No

i need to set the mexfeature option to little more that
the default i tried to do it but i am getting the
following warnings.

C:\first>bp_load_gff.pl -user deepak -pass soybean -c
-maxfeature 10,000,000,000 -d soybeanv3 soybeanv3.gff

error got from this is :
Sequence:E64C20 is 64352 bp long, but the maximum
indexable feature is set to 10
,000,000,000 bp.
Please set the maxbin value to a length at least as
large as the largest feature
you wish to store.

* You will need to reinitialize the database from scratch.
* With the Perl API you do this using the -max_bin
argument to $db->initialize()
.
* With the command-line tools you do with this with
--maxfeature option.
soybeanv3.gff: 811 records loaded

so i wonder is this the usuall warning or do i need to
change some thing..plz help me.
thank you
deepak.

Discussion

  • Scott Cain

    Scott Cain - 2006-09-08
    • status: open --> closed
     
  • Scott Cain

    Scott Cain - 2006-09-08

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    stale request

     
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