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#13 how to install DBI.pm, DBD/mysql.pm

closed
None
5
2005-07-30
2005-06-26
deepak
No

i have installed mysql through ppm. how to install the
optional modules.i need to install DBI.ppm,DBD/mysql.pm
.plz give me the method.i need to load
the data from the gff file to mysql.
if i try with out the optional modules i am having the
following exceptions .
i am have the following exceptions
------------- EXCEPTION -------------
MSG: Unable to load dbi::mysqlopt adaptor: Can't
locate DBI.pm in @INC
(@INC
con
tains: ../blib/lib C:/Perl/lib C:/Perl/site/lib .) at
C:/Perl/site/lib/Bio/DB/GF
F/Adaptor/dbi.pm line 24.
BEGIN failed--compilation aborted at
C:/Perl/site/lib/Bio/DB/GFF/Adaptor/dbi.pm
line 24.
Compilation failed in require at
C:/Perl/site/lib/Bio/DB/GFF/Adaptor/dbi/mysql.p
m line 15.
BEGIN failed--compilation aborted at
C:/Perl/site/lib/Bio/DB/GFF/Adaptor/dbi/mys
ql.pm line 15.
Compilation failed in require at
C:/Perl/site/lib/Bio/DB/GFF/Adaptor/dbi/mysqlop
t.pm line 29.
BEGIN failed--compilation aborted at
C:/Perl/site/lib/Bio/DB/GFF/Adaptor/dbi/mys
qlopt.pm line 29.
Compilation failed in require at (eval 13) line 1.

STACK Bio::DB::GFF::new
C:/Perl/site/lib/Bio/DB/GFF.pm:643
STACK toplevel C:\Perl\bin\bp_load_gff.pl:107

--------------------------------------

C:\mysql\data>

Discussion

  • Lincoln Stein

    Lincoln Stein - 2005-07-15

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    user_id=224205

    Hello,

    You do not seem to have installed the bioperl PPM. Here is the
    repository that I recommend for gbrowse use:
    http://stein.cshl.org/ppm

     
  • Lincoln Stein

    Lincoln Stein - 2005-07-15
    • assigned_to: nobody --> lstein
    • status: open --> pending
     
  • SourceForge Robot

    • status: pending --> closed
     
  • SourceForge Robot

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    user_id=1312539

    This Tracker item was closed automatically by the system. It was
    previously set to a Pending status, and the original submitter
    did not respond within 14 days (the time period specified by
    the administrator of this Tracker).

     
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