From: Nomi H. <no...@us...> - 2002-04-29 18:55:17
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Update of /cvsroot/gmod/apollo/doc In directory usw-pr-cvs1:/tmp/cvs-serv23352 Modified Files: Tag: sanger_branch todo Log Message: Index: todo =================================================================== RCS file: /cvsroot/gmod/apollo/doc/Attic/todo,v retrieving revision 1.1.2.54 retrieving revision 1.1.2.55 diff -C2 -d -r1.1.2.54 -r1.1.2.55 *** todo 27 Apr 2002 06:33:20 -0000 1.1.2.54 --- todo 29 Apr 2002 18:55:14 -0000 1.1.2.55 *************** *** 5,15 **** ---------------------------------------------------- ! Mouse matters: ! - Make sure ctrl-left_mouse mouse works on all platforms ! Steve wrote: ctrl-left_mouse is used for tier dragging with three button mice. ! (Works on Linux--need to check on Windows and Mac) ! Wait a minute, this is never going to work on Macs--there, ctrl-mouse means right mouse! ! - On five-button mouse on Mac, right and middle buttons are switched ! (Can we just not worry about this? Please?) Coordinate systems: Suzi, Mark --- 5,10 ---- ---------------------------------------------------- ! There must be a memory leak. Every time a new file is loaded the memory increases by 5 or ! 10 Mb. Get OptimizeIt and try to track down: Mark Coordinate systems: Suzi, Mark *************** *** 128,131 **** --- 123,128 ---- Here's where to look: in ScaleView.java: graphics.drawString((String)labels.elementAt(tickNum++),start.x + 2,start.y - 3); + - When we center the axis numbers, make the ticks line up with the base + (instead of being to the left of the base) Can we get rid of this annoying (Linux-specific) error message: *************** *** 151,154 **** --- 148,159 ---- Should be relative to the sequence length. + Mouse matters: + - Make sure ctrl-left_mouse mouse works on all platforms + Steve wrote: ctrl-left_mouse is used for tier dragging with three button mice. + (Works on Linux--need to check on Windows and Mac) + Wait a minute, this is never going to work on Macs--there, ctrl-mouse means right mouse! + - On five-button mouse on Mac, right and middle buttons are switched + (Can we just not worry about this? Please?) + New stuff in some data files is ignored but lots of messages are printed: - Message from some data files (eg ~mgibson/sanger/data/apollo_test_list.xml) *************** *** 156,162 **** For now, left this message there. Should we be parsing aspect? What is it? - There must be a memory leak. Every time a new file is loaded the memory increases by 5 or - 10 Mb. Get OptimizeIt and try to track down: Mark - This bug has been happening this morning occasionally, but we can't find a way to make it happen: --- 161,164 ---- *************** *** 192,195 **** --- 194,201 ---- Desired new features -------------------- + + Show BOTH forward and reverse sequences--forward above axis, rev below: Mark + - Be sure to handle "reverse complement" appropriately + x When user revcomps, turn axis numbers from black to red: Nomi Fix/extend "Translate": Mark |