[Gmod-gbrowse-cmts] Generic-Genome-Browser/lib/Bio/Graphics Wiggle.pm, 1.1.2.13, 1.1.2.14

[Lincoln S. <ls...@us...>]

Update of /cvsroot/gmod/Generic-Genome-Browser/lib/Bio/Graphics
In directory sc8-pr-cvs2.sourceforge.net:/tmp/cvs-serv9021/lib/Bio/Graphics

Modified Files:
      Tag: stable
	Wiggle.pm 
Log Message:
improved behavior of xy and density plots when spanning regions that contained undefined scores; now just skips over these regions

Index: Wiggle.pm
===================================================================
RCS file: /cvsroot/gmod/Generic-Genome-Browser/lib/Bio/Graphics/Attic/Wiggle.pm,v
retrieving revision 1.1.2.13
retrieving revision 1.1.2.14
diff -C2 -d -r1.1.2.13 -r1.1.2.14
*** Wiggle.pm	21 Feb 2008 16:17:23 -0000	1.1.2.13
--- Wiggle.pm	22 Feb 2008 16:10:30 -0000	1.1.2.14
***************
*** 364,369 ****
    my $span = $self->span;
  
!   return unless $start >= 1;
!   return unless ($end - $span) <= $self->end;
  
    # generate list of positions to sample from
--- 364,370 ----
    my $span = $self->span;
  
!   croak "Value of start position ($start) is less than 1" unless $start >=1;
!   croak "Value of end position ($end) is greater than max data value of",$self->end+$span
!       unless ($end - $span) <= $self->end;
  
    # generate list of positions to sample from