[Gmod-apollo-cmts] CVS: apollo/src/java/apollo/datamodel Range.java,1.26,1.27

[Mark G. <mg...@us...>]

Update of /cvsroot/gmod/apollo/src/java/apollo/datamodel
In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv12096/src/java/apollo/datamodel

Modified Files:
	Range.java 
Log Message:
woopsy - fixed bug in chado xml writer - forgot to set strand on
temporary range for protein in writePepFeatLoc - i think i assume that
Range will figure the strand from the start and end - which leads to
the question shouldnt it? shouldnt range via setStart setEnd setHigh
setLow set its strand accordingly? any reason it shouldnt? of course
the range could be wrong in between the setStart & setEnd but who
cares as one always follows the other - oh actually that is
problematic as its chicken & egg - strand is used in setStart to set
high or low - wait no it could still work just do strand check before
doing hi & lo - it might be nice as it doesnt seem like it should be
necasary to set strand after setting start & end



Index: Range.java
===================================================================
RCS file: /cvsroot/gmod/apollo/src/java/apollo/datamodel/Range.java,v
retrieving revision 1.26
retrieving revision 1.27
diff -C2 -d -r1.26 -r1.27
*** Range.java	12 Nov 2005 00:40:34 -0000	1.26
--- Range.java	6 Dec 2005 00:37:50 -0000	1.27
***************
*** 98,101 ****
--- 98,102 ----
  
    public void setStart(int start) {
+     // check if strand is proper given start value?
      if (getStrand() == -1) {
        high = start;