From: Mark G. <mg...@us...> - 2005-07-29 20:31:26
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Update of /cvsroot/gmod/apollo/src/java/apollo/dataadapter/chado In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv23313/src/java/apollo/dataadapter/chado Modified Files: XmlConfigFileParser.java Log Message: broke out relationship cv to chado config file Index: XmlConfigFileParser.java =================================================================== RCS file: /cvsroot/gmod/apollo/src/java/apollo/dataadapter/chado/XmlConfigFileParser.java,v retrieving revision 1.3 retrieving revision 1.4 diff -C2 -d -r1.3 -r1.4 *** XmlConfigFileParser.java 29 Jul 2005 18:02:51 -0000 1.3 --- XmlConfigFileParser.java 29 Jul 2005 20:30:43 -0000 1.4 *************** *** 178,181 **** --- 178,182 ---- String instName = null; String featureCV = null; + String relationshipCV = null; List oneLevelNames = new ArrayList(); List threeLevelNames = new ArrayList(); *************** *** 198,201 **** --- 199,207 ---- } + // RELATIONSHIP CV + else if (nodeName.equals("relationshipCV")) { + relationshipCV = getTextNodeValue(node); + } + // ONE LEVEL ANNOT TYPES else if (nodeName.equals("oneLevelAnnotTypes")) { *************** *** 233,236 **** --- 239,244 ---- if (featureCV != null) inst.setFeatureCVName(featureCV); + if (relationshipCV != null) + inst.setRelationshipCVName(relationshipCV); if (genePredictionPrograms != null) inst.setPredictionPrograms(genePredictionPrograms); |