[Gmod-apollo-cmts] CVS: apollo/src/java/apollo/gui/annotinfo GeneEditPanel.java,1.76,1.77

[Mark G. <mg...@us...>]

Update of /cvsroot/gmod/apollo/src/java/apollo/gui/annotinfo
In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv15900/src/java/apollo/gui/annotinfo

Modified Files:
	GeneEditPanel.java 
Log Message:
changing type now changes transcript and exon id in addition to gene
id. this is done in the name adapter where it belongs - theres other
exon id stuff that belongs there as well. renamed
AnnotationChangeCoalescer ChangeList as it should be. 



Index: GeneEditPanel.java
===================================================================
RCS file: /cvsroot/gmod/apollo/src/java/apollo/gui/annotinfo/GeneEditPanel.java,v
retrieving revision 1.76
retrieving revision 1.77
diff -C2 -d -r1.76 -r1.77
*** GeneEditPanel.java	20 Dec 2004 21:42:18 -0000	1.76
--- GeneEditPanel.java	21 Dec 2004 23:24:46 -0000	1.77
***************
*** 370,374 ****
      aue.setOldString(getEditedFeature().getId());
      aue.setOldId(getEditedFeature().getId());
!     getEditedFeature().setId(getGuiId());
      fireAnnotEvent(aue);
    }
--- 370,376 ----
      aue.setOldString(getEditedFeature().getId());
      aue.setOldId(getEditedFeature().getId());
!     //getEditedFeature().setId(getGuiId());
!     // eventually should return a ChangeList
!     getNameAdapter().setId(getEditedFeature(),getGuiId());
      fireAnnotEvent(aue);
    }
***************
*** 455,459 ****
        aue.setOldString(trans.getName());
        // Set transcript name based on parent's name
!       getNameAdapter().setName(trans, annot);
        fireAnnotEvent(aue);
      }
--- 457,461 ----
        aue.setOldString(trans.getName());
        // Set transcript name based on parent's name
!       getNameAdapter().setTranscriptNameFromAnnot(trans, annot);
        fireAnnotEvent(aue);
      }