#116 Bisulfite read BAM visualization

[David Nix]

Would be nice if IGB properly visualized bisulfite/ methylation alignment data where all non methylated Cs are converted to Ts. These shouldn't be flagged as a snp but as a proper match. C's present should be highlighted in red or some other obnoxious color since this is often what folks are looking for, sites of methylation. There would have to be some sort of track property that could be set indicating that this particular BAM data was from BisSeq data.

[Ann E. Loraine]

Great idea! Can you send Hiral some sample data we could use for testing?