http://www.ebi.ac.uk/ena/about/cram_toolkit https://github.com/enasequence/cramtools/
For archiving purposes, CRAM would be a more compact solution.
Bugs and other requests: #265
Sounds reasonable.
Some questions: What do we gain by supporting an additional data format? Does it support indexed/interactive access? Do other commonly used tools support CRAM as either input or default output?
On 2/7/2014 4:54 AM, Thomas Van Parys wrote:
[bugs-and-other-requests:#265] http://sourceforge.net/p/genomeview/bugs-and-other-requests/265/ CRAM support Status: open Created: Fri Feb 07, 2014 09:54 AM UTC by Thomas Van Parys Last Updated: Fri Feb 07, 2014 09:54 AM UTC Owner: nobody http://www.ebi.ac.uk/ena/about/cram_toolkit https://github.com/enasequence/cramtools/ For archiving purposes, CRAM would be a more compact solution. Sent from sourceforge.net because you indicated interest in https://sourceforge.net/p/genomeview/bugs-and-other-requests/265/ To unsubscribe from further messages, please visit https://sourceforge.net/auth/subscriptions/
[bugs-and-other-requests:#265] http://sourceforge.net/p/genomeview/bugs-and-other-requests/265/ CRAM support
Status: open Created: Fri Feb 07, 2014 09:54 AM UTC by Thomas Van Parys Last Updated: Fri Feb 07, 2014 09:54 AM UTC Owner: nobody
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Sounds reasonable.
Some questions:
What do we gain by supporting an additional data format?
Does it support indexed/interactive access?
Do other commonly used tools support CRAM as either input or default output?
On 2/7/2014 4:54 AM, Thomas Van Parys wrote:
Related
Bugs and other requests: #265