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#10697 New term request_viral protein binding

None
closed-rejected
None
5
2014-04-25
2014-03-10
Mais Ammari
No

Term name: viral protein binding

Ontology: Molecular Function

Definition: Interacting selectively and non-covalently with a viral protein, a protein generated by a virus.

Suggest to appear under GO:0005515 protein binding

Literature references: PMID 24263861, PMID 12604806, PMID 11922617

Related

Ontology requests: #10697

Discussion

  • David Osumi-Sutherland

    • assigned_to: David Osumi-Sutherland
     
    • Mais Ammari

      Mais Ammari - 2014-04-02

      Any updates on the requested term? Thanks.


      From: David Osumi-Sutherland [djs93@users.sf.net]
      Sent: Tuesday, March 11, 2014 5:28 AM
      To: [geneontology:ontology-requests]
      Subject: [geneontology:ontology-requests] #10697 New term request_viral protein binding

      • assigned_to: David Osumi-Sutherland

      [ontology-requests:#10697]http://sourceforge.net/p/geneontology/ontology-requests/10697/ New term request_viral protein binding

      Status: open
      Group: None
      Created: Mon Mar 10, 2014 09:38 PM UTC by Mais Ammari
      Last Updated: Mon Mar 10, 2014 09:38 PM UTC
      Owner: David Osumi-Sutherland

      Term name: viral protein binding

      Ontology: Molecular Function

      Definition: Interacting selectively and non-covalently with a viral protein, a protein generated by a virus.

      Suggest to appear under GO:0005515 protein binding

      Literature references: PMID 24263861, PMID 12604806, PMID 11922617


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      Related

      Ontology requests: #10697

  • Harold J. Drabkin

    A protein is a protein. It doesn't matter where it is from as a classification. It is not a protein family or some functional class based on amino acid sequence like collagens, actins or tubulins;

     

    Last edit: Harold J. Drabkin 2014-04-02
  • Pascale Gaudet

    Pascale Gaudet - 2014-04-03

    +1

     
  • David Osumi-Sutherland

    Agree with Harold here that the clause 'a protein generated by a virus' should not be used. I'm also worried that this is too general a term to add. Will discuss with editors.

     
  • David Osumi-Sutherland

    • status: open --> closed-rejected
     
  • David Osumi-Sutherland

    Hi Mais,

    A new term is not needed. You can record this as:

    'protein binding' IPI with {some target viral protein}

    see http://geneontology.org/GO.evidence.shtml#ipi

    • David
     

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