[Gdcm-hackers] gdcm-git:Grassroots DICOM branch release updated. b2eb2873a234895b09764a2e9c30a0a5ab
Cross-platform DICOM implementation
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[Gdcm-hackers] gdcm-git:Grassroots DICOM branch release updated. b2eb2873a234895b09764a2e9c30a0a5ab89e2c2
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From: Mathieu M. <ma...@us...> - 2019-04-26 15:29:54
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This is an automated email from the git hooks/post-receive script. It was
generated because a ref change was pushed to the repository containing
the project "Grassroots DICOM".
The branch, release has been updated
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- Log -----------------------------------------------------------------
-----------------------------------------------------------------------
Summary of changes:
.travis.yml | 90 +-
Applications/CMakeLists.txt | 2 +-
Applications/Cxx/gdcmanon.cxx | 42 +-
Applications/Cxx/gdcmconv.cxx | 53 +-
Applications/Cxx/gdcmdiff.cxx | 2 +-
Applications/Cxx/gdcmdump.cxx | 14 +-
Applications/Cxx/gdcmgendir.cxx | 10 +-
Applications/Cxx/gdcmimg.cxx | 12 +-
Applications/Cxx/gdcminfo.cxx | 18 +-
Applications/Cxx/gdcmpap3.cxx | 10 +-
Applications/Cxx/gdcmraw.cxx | 14 +-
Applications/Cxx/gdcmscanner.cxx | 14 +-
Applications/Cxx/gdcmscu.cxx | 20 +-
Applications/Cxx/gdcmtar.cxx | 12 +-
Applications/Cxx/gdcmxml.cxx | 10 +-
CMake/FindJNI.cmake | 83 -
CMake/InstallMacros.cmake | 2 +-
CMakeLists.txt | 113 +-
Examples/CMakeLists.txt | 10 +-
Examples/Cxx/DiscriminateVolume.cxx | 2 +-
Examples/Cxx/DumpADAC.cxx | 2 +-
Examples/Cxx/DumpExamCard.cxx | 2 +-
Examples/Cxx/DumpImageHeaderInfo.cxx | 2 +-
Examples/Cxx/DumpToSQLITE3.cxx | 12 +-
Examples/Cxx/FixJAIBugJPEGLS.cxx | 31 +-
Examples/Cxx/GenAllVR.cxx | 2 +-
Examples/Cxx/PublicDict.cxx | 2 +-
Examples/Cxx/ReadAndDumpDICOMDIR2.cxx | 0
Examples/Cxx/SimpleScanner.cxx | 2 +-
Examples/Cxx/uid_unique.cxx | 2 +-
Examples/Python/CreateRAWStorage.py | 6 +-
Examples/Python/DecompressImage.py | 2 +-
Examples/Python/FindAllPatientName.py | 2 +-
Examples/Python/ManipulateSequence.py | 2 +-
Examples/Python/NewSequence.py | 2 +-
README.txt => README.md | 0
Source/CMakeLists.txt | 16 +-
Source/Common/CMakeLists.txt | 1 +
Source/Common/gdcmASN1.h | 5 +-
Source/Common/gdcmBase64.h | 5 +-
Source/Common/gdcmBoxRegion.h | 14 +-
.../Common/gdcmCAPICryptographicMessageSyntax.cxx | 52 +-
Source/Common/gdcmCAPICryptographicMessageSyntax.h | 4 +-
Source/Common/gdcmCommand.cxx | 6 +-
Source/Common/gdcmCommand.h | 41 +-
Source/Common/gdcmCryptoFactory.cxx | 10 +-
Source/Common/gdcmCryptoFactory.h | 4 +-
Source/Common/gdcmCryptographicMessageSyntax.h | 10 +-
Source/Common/gdcmDataEvent.h | 17 +-
Source/Common/gdcmDirectory.h | 4 +-
Source/Common/gdcmDummyValueGenerator.cxx | 2 +-
Source/Common/gdcmEvent.cxx | 9 +-
Source/Common/gdcmEvent.h | 6 +-
Source/Common/gdcmException.h | 4 +-
Source/Common/gdcmFileNameEvent.h | 15 +-
Source/Common/gdcmFilename.cxx | 2 +-
Source/Common/gdcmFilenameGenerator.cxx | 2 +-
Source/Common/gdcmFilenameGenerator.h | 2 +-
Source/Common/gdcmProgressEvent.h | 14 +-
Source/Common/gdcmRegion.cxx | 6 +-
Source/Common/gdcmSHA1.h | 5 +-
Source/Common/gdcmSmartPointer.h | 4 +-
Source/Common/gdcmSubject.cxx | 2 +-
Source/Common/gdcmSubject.h | 2 +-
Source/Common/gdcmSwapCode.cxx | 2 +-
Source/Common/gdcmSystem.cxx | 20 +-
Source/Common/gdcmTerminal.cxx | 12 +-
Source/Common/gdcmTesting.cxx | 25 +-
Source/Common/gdcmTesting.h | 12 +-
Source/Common/gdcmTrace.cxx | 8 +-
Source/Common/gdcmVersion.h | 4 +-
Source/Common/gdcmWin32.h | 2 +-
Source/Common/zipstreamimpl.h | 14 +-
Source/Common/zipstreamimpl.hpp | 16 +-
Source/DataDictionary/DefaultDicts.xsl | 6 +
Source/DataDictionary/Part6.xml | 2 +-
Source/DataDictionary/TagToType.xsl | 8 +-
.../DataDictionary/gdcmCSAHeaderDefaultDicts.cxx | 4 +-
Source/DataDictionary/gdcmCSAHeaderDict.h | 4 +-
Source/DataDictionary/gdcmDefaultDicts.cxx | 712 +-
Source/DataDictionary/gdcmDefaultGroupNames.cxx | 4 +-
Source/DataDictionary/gdcmDict.h | 16 +-
Source/DataDictionary/gdcmDictEntry.cxx | 30 +-
Source/DataDictionary/gdcmDicts.cxx | 3 +-
Source/DataDictionary/gdcmDicts.h | 6 +-
Source/DataDictionary/gdcmGlobal.cxx | 16 +-
Source/DataDictionary/gdcmGlobal.h | 4 +-
Source/DataDictionary/gdcmGroupDict.h | 2 +-
Source/DataDictionary/gdcmPrivateDefaultDicts.cxx | 4 +-
Source/DataDictionary/gdcmSOPClassUIDToIOD.cxx | 10 +-
Source/DataDictionary/gdcmTagToType.h | 24483 +++++++++++--------
Source/DataDictionary/gdcmUIDs.cxx | 6 +-
.../CMakeLists.txt | 1 +
.../gdcmAttribute.h | 26 +-
.../gdcmByteSwapFilter.cxx | 3 +-
.../gdcmByteSwapFilter.h | 3 +-
.../gdcmByteValue.h | 18 +-
.../gdcmCP246ExplicitDataElement.txx | 4 +-
.../gdcmCSAElement.h | 13 +-
.../gdcmCSAHeader.h | 10 +-
.../gdcmCSAHeader.txx | 34 -
.../gdcmDataElement.cxx | 8 +-
.../gdcmDataElement.h | 16 +-
.../gdcmDataSet.cxx | 4 +-
.../gdcmDataSet.h | 5 +-
.../gdcmDataSetEvent.h | 17 +-
.../gdcmElement.h | 213 +-
.../gdcmExplicitDataElement.txx | 4 +-
.../gdcmExplicitImplicitDataElement.txx | 6 +-
.../gdcmFile.cxx | 4 +-
.../DataStructureAndEncodingDefinition/gdcmFile.h | 2 +-
.../gdcmFileMetaInformation.cxx | 8 +-
.../gdcmImplicitDataElement.txx | 8 +-
.../gdcmMediaStorage.cxx | 204 +-
.../gdcmMrProtocol.cxx | 6 +-
.../gdcmPDBElement.h | 2 +-
.../gdcmPDBHeader.h | 4 +-
.../gdcmParseException.h | 5 +-
.../gdcmPreamble.cxx | 6 +-
.../gdcmReader.cxx | 12 +-
.../gdcmSequenceOfFragments.h | 10 +-
.../gdcmSequenceOfItems.h | 10 +-
.../gdcmTransferSyntax.cxx | 4 +-
.../gdcmUNExplicitDataElement.txx | 4 +-
.../DataStructureAndEncodingDefinition/gdcmVM.cxx | 8 +-
Source/DataStructureAndEncodingDefinition/gdcmVM.h | 3 +-
.../DataStructureAndEncodingDefinition/gdcmVR.cxx | 103 +-
Source/DataStructureAndEncodingDefinition/gdcmVR.h | 40 +-
.../gdcmVR16ExplicitDataElement.txx | 4 +-
.../DataStructureAndEncodingDefinition/gdcmValue.h | 4 +-
.../gdcmWriter.cxx | 6 +-
.../InformationObjectDefinition/gdcmDefinedTerms.h | 3 +-
Source/InformationObjectDefinition/gdcmDefs.cxx | 8 +-
Source/InformationObjectDefinition/gdcmDefs.h | 4 +-
.../gdcmEnumeratedValues.h | 3 +-
Source/InformationObjectDefinition/gdcmIOD.h | 2 +-
Source/InformationObjectDefinition/gdcmIODs.h | 2 +-
Source/InformationObjectDefinition/gdcmMacro.h | 2 +-
Source/InformationObjectDefinition/gdcmMacros.h | 2 +-
Source/InformationObjectDefinition/gdcmModule.h | 2 +-
.../InformationObjectDefinition/gdcmModuleEntry.h | 2 +-
Source/InformationObjectDefinition/gdcmModules.h | 2 +-
Source/InformationObjectDefinition/gdcmPatient.h | 3 +-
Source/InformationObjectDefinition/gdcmSeries.h | 3 +-
Source/InformationObjectDefinition/gdcmStudy.h | 3 +-
Source/InformationObjectDefinition/gdcmTable.h | 10 +-
.../InformationObjectDefinition/gdcmTableEntry.h | 6 +-
.../gdcmTableReader.cxx | 2 +-
.../InformationObjectDefinition/gdcmTableReader.h | 2 +-
Source/InformationObjectDefinition/gdcmType.cxx | 4 +-
Source/InformationObjectDefinition/gdcmUsage.cxx | 4 +-
Source/MediaStorageAndFileFormat/CMakeLists.txt | 1 +
.../MediaStorageAndFileFormat/gdcmAnonymizeEvent.h | 15 +-
.../MediaStorageAndFileFormat/gdcmAnonymizer.cxx | 9 +-
Source/MediaStorageAndFileFormat/gdcmAnonymizer.h | 4 +-
.../MediaStorageAndFileFormat/gdcmAudioCodec.cxx | 6 +-
Source/MediaStorageAndFileFormat/gdcmAudioCodec.h | 8 +-
Source/MediaStorageAndFileFormat/gdcmBitmap.cxx | 8 +-
Source/MediaStorageAndFileFormat/gdcmBitmap.h | 6 +-
.../gdcmBitmapToBitmapFilter.cxx | 5 +-
.../gdcmBitmapToBitmapFilter.h | 2 +-
Source/MediaStorageAndFileFormat/gdcmCoder.h | 2 +-
Source/MediaStorageAndFileFormat/gdcmCurve.cxx | 2 +-
Source/MediaStorageAndFileFormat/gdcmCurve.h | 4 +-
Source/MediaStorageAndFileFormat/gdcmDICOMDIR.h | 5 +-
.../gdcmDICOMDIRGenerator.cxx | 14 +-
.../gdcmDataSetHelper.cxx | 4 +-
Source/MediaStorageAndFileFormat/gdcmDecoder.h | 2 +-
.../MediaStorageAndFileFormat/gdcmDictPrinter.cxx | 9 +-
.../gdcmDirectionCosines.cxx | 2 +-
Source/MediaStorageAndFileFormat/gdcmDumper.h | 2 +-
.../gdcmEncapsulatedDocument.h | 2 +-
.../gdcmEquipmentManufacturer.cxx | 103 +
.../gdcmEquipmentManufacturer.h} | 35 +-
Source/MediaStorageAndFileFormat/gdcmFiducials.h | 2 +-
.../gdcmFileAnonymizer.cxx | 4 +-
.../MediaStorageAndFileFormat/gdcmFileAnonymizer.h | 2 +-
.../gdcmFileChangeTransferSyntax.cxx | 2 +-
.../gdcmFileChangeTransferSyntax.h | 2 +-
.../gdcmFileDecompressLookupTable.h | 4 +-
.../gdcmFileDerivation.cxx | 10 +-
.../gdcmFileExplicitFilter.cxx | 4 +-
.../gdcmFileExplicitFilter.h | 2 +-
.../MediaStorageAndFileFormat/gdcmFileStreamer.cxx | 8 +-
.../MediaStorageAndFileFormat/gdcmFileStreamer.h | 2 +-
Source/MediaStorageAndFileFormat/gdcmIPPSorter.cxx | 4 +-
Source/MediaStorageAndFileFormat/gdcmIPPSorter.h | 2 +-
.../gdcmIconImageFilter.cxx | 12 +-
Source/MediaStorageAndFileFormat/gdcmImage.cxx | 4 +-
Source/MediaStorageAndFileFormat/gdcmImage.h | 4 +-
.../gdcmImageApplyLookupTable.cxx | 37 +-
.../gdcmImageApplyLookupTable.h | 10 +-
.../gdcmImageChangePhotometricInterpretation.h | 2 +-
.../gdcmImageChangePlanarConfiguration.h | 2 +-
.../gdcmImageChangeTransferSyntax.h | 4 +-
.../MediaStorageAndFileFormat/gdcmImageCodec.cxx | 3 +-
Source/MediaStorageAndFileFormat/gdcmImageCodec.h | 10 +-
.../gdcmImageFragmentSplitter.h | 2 +-
.../MediaStorageAndFileFormat/gdcmImageHelper.cxx | 169 +-
.../MediaStorageAndFileFormat/gdcmImageReader.cxx | 3 +-
Source/MediaStorageAndFileFormat/gdcmImageReader.h | 8 +-
.../gdcmImageRegionReader.cxx | 2 +-
.../gdcmImageRegionReader.h | 4 +-
.../gdcmImageToImageFilter.h | 2 +-
.../MediaStorageAndFileFormat/gdcmImageWriter.cxx | 3 +-
Source/MediaStorageAndFileFormat/gdcmImageWriter.h | 8 +-
Source/MediaStorageAndFileFormat/gdcmJPEG12Codec.h | 12 +-
Source/MediaStorageAndFileFormat/gdcmJPEG16Codec.h | 12 +-
.../gdcmJPEG2000Codec.cxx | 63 +-
.../MediaStorageAndFileFormat/gdcmJPEG2000Codec.h | 32 +-
Source/MediaStorageAndFileFormat/gdcmJPEG8Codec.h | 12 +-
.../gdcmJPEGBITSCodec.hxx | 14 +-
Source/MediaStorageAndFileFormat/gdcmJPEGCodec.cxx | 6 +-
Source/MediaStorageAndFileFormat/gdcmJPEGCodec.h | 32 +-
.../MediaStorageAndFileFormat/gdcmJPEGLSCodec.cxx | 74 +-
Source/MediaStorageAndFileFormat/gdcmJPEGLSCodec.h | 26 +-
.../MediaStorageAndFileFormat/gdcmKAKADUCodec.cxx | 5 +-
Source/MediaStorageAndFileFormat/gdcmKAKADUCodec.h | 12 +-
.../MediaStorageAndFileFormat/gdcmLookupTable.cxx | 2 +-
Source/MediaStorageAndFileFormat/gdcmLookupTable.h | 4 +-
.../gdcmMeshPrimitive.cxx | 9 +-
.../MediaStorageAndFileFormat/gdcmMeshPrimitive.h | 2 +-
.../MediaStorageAndFileFormat/gdcmOrientation.cxx | 6 +-
Source/MediaStorageAndFileFormat/gdcmOverlay.h | 4 +-
Source/MediaStorageAndFileFormat/gdcmPDFCodec.cxx | 6 +-
Source/MediaStorageAndFileFormat/gdcmPDFCodec.h | 8 +-
Source/MediaStorageAndFileFormat/gdcmPGXCodec.cxx | 8 +-
Source/MediaStorageAndFileFormat/gdcmPGXCodec.h | 10 +-
Source/MediaStorageAndFileFormat/gdcmPNMCodec.cxx | 5 +-
Source/MediaStorageAndFileFormat/gdcmPNMCodec.h | 10 +-
Source/MediaStorageAndFileFormat/gdcmPVRGCodec.cxx | 5 +-
Source/MediaStorageAndFileFormat/gdcmPVRGCodec.h | 12 +-
.../gdcmPhotometricInterpretation.cxx | 4 +-
.../MediaStorageAndFileFormat/gdcmPixelFormat.cxx | 2 +-
Source/MediaStorageAndFileFormat/gdcmPixmap.cxx | 2 +-
Source/MediaStorageAndFileFormat/gdcmPixmap.h | 8 +-
.../MediaStorageAndFileFormat/gdcmPixmapReader.cxx | 3 +-
.../MediaStorageAndFileFormat/gdcmPixmapReader.h | 4 +-
.../gdcmPixmapToPixmapFilter.cxx | 3 +-
.../gdcmPixmapToPixmapFilter.h | 2 +-
.../MediaStorageAndFileFormat/gdcmPixmapWriter.cxx | 5 +-
.../MediaStorageAndFileFormat/gdcmPixmapWriter.h | 4 +-
Source/MediaStorageAndFileFormat/gdcmPrinter.cxx | 46 +-
Source/MediaStorageAndFileFormat/gdcmRAWCodec.cxx | 2 +-
Source/MediaStorageAndFileFormat/gdcmRAWCodec.h | 16 +-
Source/MediaStorageAndFileFormat/gdcmRLECodec.cxx | 18 +-
Source/MediaStorageAndFileFormat/gdcmRLECodec.h | 28 +-
Source/MediaStorageAndFileFormat/gdcmRescaler.h | 2 +-
Source/MediaStorageAndFileFormat/gdcmScanner.cxx | 7 +-
Source/MediaStorageAndFileFormat/gdcmScanner.h | 4 +-
Source/MediaStorageAndFileFormat/gdcmSegment.cxx | 9 +-
Source/MediaStorageAndFileFormat/gdcmSegment.h | 2 +-
.../gdcmSegmentReader.cxx | 8 +-
.../MediaStorageAndFileFormat/gdcmSegmentReader.h | 4 +-
.../gdcmSegmentWriter.cxx | 8 +-
.../MediaStorageAndFileFormat/gdcmSegmentWriter.h | 4 +-
.../gdcmSegmentedPaletteColorLookupTable.cxx | 22 +-
.../gdcmSegmentedPaletteColorLookupTable.h | 6 +-
.../MediaStorageAndFileFormat/gdcmSerieHelper.cxx | 6 +-
.../gdcmSimpleSubjectWatcher.h | 4 +-
Source/MediaStorageAndFileFormat/gdcmSorter.cxx | 7 +-
Source/MediaStorageAndFileFormat/gdcmSpacing.cxx | 4 +-
.../MediaStorageAndFileFormat/gdcmSpectroscopy.h | 2 +-
.../gdcmSplitMosaicFilter.cxx | 2 +-
.../gdcmStreamImageReader.cxx | 3 +-
.../gdcmStrictScanner.cxx | 7 +-
.../MediaStorageAndFileFormat/gdcmStrictScanner.h | 4 +-
.../MediaStorageAndFileFormat/gdcmStringFilter.cxx | 25 +-
Source/MediaStorageAndFileFormat/gdcmSurface.cxx | 42 +-
Source/MediaStorageAndFileFormat/gdcmSurface.h | 2 +-
.../gdcmSurfaceReader.cxx | 8 +-
.../MediaStorageAndFileFormat/gdcmSurfaceReader.h | 4 +-
.../gdcmSurfaceWriter.cxx | 15 +-
.../MediaStorageAndFileFormat/gdcmSurfaceWriter.h | 4 +-
Source/MediaStorageAndFileFormat/gdcmTagPath.cxx | 7 +-
.../MediaStorageAndFileFormat/gdcmUIDGenerator.cxx | 8 +-
.../gdcmUUIDGenerator.cxx | 2 +-
Source/MediaStorageAndFileFormat/gdcmValidate.cxx | 5 +-
Source/MediaStorageAndFileFormat/gdcmWaveform.h | 2 +-
.../MediaStorageAndFileFormat/gdcmXMLPrinter.cxx | 45 +-
Source/MessageExchangeDefinition/gdcmAAbortPDU.cxx | 2 +-
Source/MessageExchangeDefinition/gdcmAAbortPDU.h | 10 +-
.../gdcmAAssociateACPDU.h | 10 +-
.../gdcmAAssociateRJPDU.cxx | 6 +-
.../gdcmAAssociateRJPDU.h | 10 +-
.../gdcmAAssociateRQPDU.cxx | 4 +-
.../gdcmAAssociateRQPDU.h | 10 +-
.../MessageExchangeDefinition/gdcmAReleaseRPPDU.h | 10 +-
.../MessageExchangeDefinition/gdcmAReleaseRQPDU.h | 10 +-
.../gdcmBaseCompositeMessage.h | 2 +-
.../gdcmBaseNormalizedMessage.h | 2 +-
Source/MessageExchangeDefinition/gdcmBasePDU.h | 2 +-
Source/MessageExchangeDefinition/gdcmBaseQuery.cxx | 8 +-
Source/MessageExchangeDefinition/gdcmBaseQuery.h | 5 +-
.../gdcmBaseRootQuery.cxx | 2 +-
.../MessageExchangeDefinition/gdcmBaseRootQuery.h | 4 +-
.../MessageExchangeDefinition/gdcmCEchoMessages.h | 2 +-
.../MessageExchangeDefinition/gdcmCFindMessages.h | 2 +-
.../MessageExchangeDefinition/gdcmCMoveMessages.h | 2 +-
.../gdcmCStoreMessages.cxx | 2 +-
.../MessageExchangeDefinition/gdcmCStoreMessages.h | 4 +-
.../MessageExchangeDefinition/gdcmCommandDataSet.h | 4 +-
.../gdcmCompositeMessageFactory.cxx | 2 +-
.../gdcmCompositeNetworkFunctions.cxx | 10 +-
.../gdcmCompositeNetworkFunctions.h | 14 +-
.../gdcmFindPatientRootQuery.cxx | 4 +-
.../gdcmFindPatientRootQuery.h | 8 +-
.../gdcmFindStudyRootQuery.cxx | 4 +-
.../gdcmFindStudyRootQuery.h | 8 +-
...gdcmModalityPerformedProcedureStepCreateQuery.h | 4 +-
.../gdcmModalityPerformedProcedureStepSetQuery.h | 4 +-
.../gdcmMovePatientRootQuery.cxx | 4 +-
.../gdcmMovePatientRootQuery.h | 8 +-
.../gdcmMoveStudyRootQuery.cxx | 4 +-
.../gdcmMoveStudyRootQuery.h | 8 +-
.../gdcmNActionMessages.h | 2 +-
.../gdcmNCreateMessages.h | 2 +-
.../gdcmNDeleteMessages.h | 2 +-
.../gdcmNEventReportMessages.h | 2 +-
.../MessageExchangeDefinition/gdcmNGetMessages.h | 2 +-
.../MessageExchangeDefinition/gdcmNSetMessages.h | 2 +-
.../gdcmNormalizedNetworkFunctions.cxx | 4 +-
.../MessageExchangeDefinition/gdcmPDUFactory.cxx | 18 +-
Source/MessageExchangeDefinition/gdcmPDataTFPDU.h | 10 +-
.../gdcmPresentationContext.cxx | 2 +-
.../gdcmPresentationContextGenerator.cxx | 2 +-
Source/MessageExchangeDefinition/gdcmQueryBase.h | 2 +-
.../MessageExchangeDefinition/gdcmQueryFactory.cxx | 4 +-
.../MessageExchangeDefinition/gdcmQueryImage.cxx | 8 +-
Source/MessageExchangeDefinition/gdcmQueryImage.h | 12 +-
.../MessageExchangeDefinition/gdcmQueryPatient.cxx | 28 +-
.../MessageExchangeDefinition/gdcmQueryPatient.h | 12 +-
.../MessageExchangeDefinition/gdcmQuerySeries.cxx | 8 +-
Source/MessageExchangeDefinition/gdcmQuerySeries.h | 12 +-
.../MessageExchangeDefinition/gdcmQueryStudy.cxx | 110 +-
Source/MessageExchangeDefinition/gdcmQueryStudy.h | 12 +-
.../gdcmServiceClassUser.cxx | 40 +-
.../gdcmServiceClassUser.h | 8 +-
Source/MessageExchangeDefinition/gdcmULAction.h | 10 +-
Source/MessageExchangeDefinition/gdcmULActionAA.h | 16 +-
.../MessageExchangeDefinition/gdcmULActionAE.cxx | 2 +-
Source/MessageExchangeDefinition/gdcmULActionAE.h | 16 +-
Source/MessageExchangeDefinition/gdcmULActionAR.h | 20 +-
.../MessageExchangeDefinition/gdcmULActionDT.cxx | 4 +-
Source/MessageExchangeDefinition/gdcmULActionDT.h | 4 +-
.../gdcmULBasicCallback.h | 8 +-
.../MessageExchangeDefinition/gdcmULConnection.cxx | 40 +-
.../MessageExchangeDefinition/gdcmULConnection.h | 5 +-
.../gdcmULConnectionCallback.h | 2 +-
.../gdcmULConnectionInfo.cxx | 3 +-
.../gdcmULConnectionManager.cxx | 86 +-
.../gdcmULConnectionManager.h | 6 +-
Source/MessageExchangeDefinition/gdcmULEvent.h | 4 +-
.../gdcmULTransitionTable.cxx | 2 +-
.../gdcmULTransitionTable.h | 8 +-
.../gdcmULWritingCallback.h | 8 +-
.../gdcmUserInformation.cxx | 2 +-
.../gdcmUserInformation.h | 2 +-
.../MessageExchangeDefinition/gdcmWLMFindQuery.h | 8 +-
Testing/CMakeLists.txt | 2 +-
Testing/Source/CMakeLists.txt | 18 +-
Testing/Source/Common/CMakeLists.txt | 4 +-
Testing/Source/Common/Cxx/TestCommand.cxx | 2 +-
.../Common/Cxx/TestCryptographicMessageSyntax.cxx | 10 +-
Testing/Source/Common/Cxx/TestMD5.cxx | 7 +-
Testing/Source/Common/Cxx/TestSmartPointer.cxx | 4 +-
Testing/Source/Common/Cxx/TestSystem1.cxx | 2 +-
Testing/Source/Common/Cxx/TestSystem3.cxx | 10 +-
Testing/Source/Common/Cxx/TestTesting.cxx | 2 +-
Testing/Source/Data/CMakeLists.txt | 3 -
Testing/Source/Data/gdcmMD5DataBrokenImages.cxx | 2 +-
Testing/Source/Data/gdcmMD5DataImages.cxx | 7 +-
Testing/Source/Data/gdcmMediaStorageDataFiles.cxx | 2 +-
.../gdcmSelectedPrivateGroupOffsetDataFiles.cxx | 5 +-
.../Data/gdcmSelectedTagsOffsetDataFiles.cxx | 5 +-
Testing/Source/Data/gdcmStreamOffsetDataFiles.cxx | 5 +-
Testing/Source/DataDictionary/CMakeLists.txt | 4 +-
.../DataDictionary/Cxx/TestSOPClassUIDToIOD.cxx | 8 +-
Testing/Source/DataDictionary/Cxx/TestUIDs.cxx | 6 +-
.../CMakeLists.txt | 6 +-
.../Cxx/TestDataElement.cxx | 4 +-
.../Cxx/TestFileMetaInformation.cxx | 2 +-
.../Cxx/TestMediaStorage.cxx | 4 +-
.../Cxx/TestPreamble.cxx | 2 +-
.../Cxx/TestPrivateTag.cxx | 6 +-
.../Cxx/TestReader3.cxx | 12 +-
.../Cxx/TestVM.cxx | 22 +-
.../Cxx/TestVR.cxx | 26 +-
.../InformationObjectDefinition/CMakeLists.txt | 4 +-
.../MediaStorageAndFileFormat/CMakeLists.txt | 10 +-
.../MediaStorageAndFileFormat/Cxx/CMakeLists.txt | 1 +
.../Cxx/TestAnonymizer2.cxx | 6 +-
.../Cxx/TestAnonymizer3.cxx | 4 +-
.../MediaStorageAndFileFormat/Cxx/TestCodec.cxx | 4 +-
.../MediaStorageAndFileFormat/Cxx/TestCoder.cxx | 2 +-
.../MediaStorageAndFileFormat/Cxx/TestCurve2.cxx | 4 +-
.../MediaStorageAndFileFormat/Cxx/TestDecoder.cxx | 2 +-
.../Cxx/TestEquipmentManufacturer.cxx | 130 +
.../Cxx/TestFileDecompressLookupTable.cxx | 4 +-
.../Cxx/TestIconImageFilter.cxx | 4 +-
.../Cxx/TestImageApplyLookupTable.cxx | 4 +-
.../MediaStorageAndFileFormat/Cxx/TestOverlay3.cxx | 6 +-
.../MediaStorageAndFileFormat/Cxx/TestPrinter1.cxx | 23 +-
.../Cxx/TestSurfaceWriter.cxx | 2 +-
.../Cxx/TestSurfaceWriter2.cxx | 2 +-
.../Cxx/TestUIDGenerator2.cxx | 6 +-
.../Java/CMakeLists.txt | 10 +-
.../Java/TestStringFilter.java | 96 +
.../Python/TestModifyFields.py | 11 +-
.../MessageExchangeDefinition/CMakeLists.txt | 2 +-
.../Cxx/TestFindPatientRootQuery.cxx | 64 +-
.../Cxx/TestFindStudyRootQuery.cxx | 54 +-
.../Cxx/TestSCUFunctions.cxx | 14 +-
.../Cxx/TestSCUValidation.cxx | 2 +-
Utilities/C99/README.txt | 2 +-
Utilities/CMakeLists.txt | 26 +-
Utilities/Release/release.sh | 26 +-
Utilities/Release/{release.sh => upload.sh} | 128 +-
Utilities/VTK/CMakeLists.txt | 6 +-
Utilities/VTK/Examples/CMakeLists.txt | 8 +-
Utilities/VTK/Testing/CMakeLists.txt | 6 +-
Utilities/VTK/vtkImageColorViewer.cxx | 10 +-
Utilities/doxygen/CMakeLists.txt | 2 +-
Utilities/gdcm_charls.h | 10 +-
Utilities/gdcmcharls/CMakeLists.txt | 17 +-
Utilities/gdcmcharls/README.GDCM.txt | 9 +-
Utilities/gdcmcharls/charls.h | 97 +
Utilities/gdcmcharls/colortransform.h | 362 +-
Utilities/gdcmcharls/config.h | 65 -
Utilities/gdcmcharls/context.h | 230 +-
Utilities/gdcmcharls/contextrunmode.h | 212 +-
Utilities/gdcmcharls/decoderstrategy.h | 640 +-
Utilities/gdcmcharls/defaulttraits.h | 267 +-
Utilities/gdcmcharls/encoderstrategy.h | 401 +-
Utilities/gdcmcharls/header.cpp | 388 -
Utilities/gdcmcharls/header.h | 70 -
Utilities/gdcmcharls/interface.cpp | 561 +-
Utilities/gdcmcharls/interface.h | 66 -
Utilities/gdcmcharls/jlscodecfactory.h | 22 +
Utilities/gdcmcharls/jpegimagedatasegment.h | 27 +-
Utilities/gdcmcharls/jpegls.cpp | 358 +-
Utilities/gdcmcharls/jpegmarker.h | 75 -
Utilities/gdcmcharls/jpegmarkercode.h | 40 +
Utilities/gdcmcharls/jpegmarkersegment.cpp | 173 +-
Utilities/gdcmcharls/jpegmarkersegment.h | 82 +-
Utilities/gdcmcharls/jpegsegment.h | 6 +-
Utilities/gdcmcharls/jpegstreamreader.cpp | 398 +
Utilities/gdcmcharls/jpegstreamreader.h | 81 +
Utilities/gdcmcharls/jpegstreamwriter.cpp | 121 +-
Utilities/gdcmcharls/jpegstreamwriter.h | 171 +-
Utilities/gdcmcharls/lookuptable.h | 142 +-
Utilities/gdcmcharls/losslesstraits.h | 258 +-
Utilities/gdcmcharls/processline.h | 705 +-
Utilities/gdcmcharls/publictypes.h | 434 +-
Utilities/gdcmcharls/scan.h | 1733 +-
Utilities/gdcmcharls/styleanddesign.txt | 38 +
Utilities/gdcmcharls/util.h | 384 +-
Utilities/gdcmexpat/CMakeLists.txt | 6 +-
Utilities/gdcmjpeg/CMakeLists.txt | 8 +-
Utilities/gdcmmd5/CMakeLists.txt | 4 +-
Utilities/gdcmopenjpeg/CMakeLists.txt | 6 +-
Utilities/gdcmopenjpeg/README.GDCM.txt | 2 +-
.../gdcmopenjpeg/src/lib/openjp2/CMakeLists.txt | 93 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/bio.c | 204 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/bio.h | 42 +-
.../gdcmopenjpeg/src/lib/openjp2/cidx_manager.c | 358 +-
.../gdcmopenjpeg/src/lib/openjp2/cidx_manager.h | 14 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/cio.c | 1005 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/cio.h | 378 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/dwt.c | 3273 ++-
Utilities/gdcmopenjpeg/src/lib/openjp2/dwt.h | 28 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/event.c | 141 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/event.h | 56 +-
.../gdcmopenjpeg/src/lib/openjp2/function_list.c | 118 +-
.../gdcmopenjpeg/src/lib/openjp2/function_list.h | 67 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/image.c | 396 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/image.h | 20 +-
.../src/lib/openjp2/indexbox_manager.h | 63 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/invert.c | 417 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/invert.h | 18 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/j2k.c | 16992 +++++++------
Utilities/gdcmopenjpeg/src/lib/openjp2/j2k.h | 1051 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/jp2.c | 5374 ++--
Utilities/gdcmopenjpeg/src/lib/openjp2/jp2.h | 331 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/mct.c | 832 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/mct.h | 66 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/mqc.c | 906 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/mqc.h | 164 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/mqc_inl.h | 196 +
Utilities/gdcmopenjpeg/src/lib/openjp2/openjpeg.c | 1609 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/openjpeg.h | 1790 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/opj_clock.c | 26 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/opj_clock.h | 10 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/opj_codec.h | 174 +-
.../lib/openjp2/{opj_inttypes.h => opj_common.h} | 31 +-
.../gdcmopenjpeg/src/lib/openjp2/opj_includes.h | 129 +-
.../gdcmopenjpeg/src/lib/openjp2/opj_intmath.h | 185 +-
.../gdcmopenjpeg/src/lib/openjp2/opj_inttypes.h | 4 +-
.../gdcmopenjpeg/src/lib/openjp2/opj_malloc.c | 300 +-
.../gdcmopenjpeg/src/lib/openjp2/opj_malloc.h | 22 +-
.../gdcmopenjpeg/src/lib/openjp2/opj_stdint.h | 4 +-
.../gdcmopenjpeg/src/lib/openjp2/phix_manager.c | 277 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/pi.c | 3534 +--
Utilities/gdcmopenjpeg/src/lib/openjp2/pi.h | 142 +-
.../gdcmopenjpeg/src/lib/openjp2/ppix_manager.c | 295 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/raw.c | 95 -
Utilities/gdcmopenjpeg/src/lib/openjp2/raw.h | 106 -
.../gdcmopenjpeg/src/lib/openjp2/sparse_array.c | 346 +
.../gdcmopenjpeg/src/lib/openjp2/sparse_array.h | 141 +
Utilities/gdcmopenjpeg/src/lib/openjp2/t1.c | 3654 +--
Utilities/gdcmopenjpeg/src/lib/openjp2/t1.h | 222 +-
.../src/lib/openjp2/t1_generate_luts.c | 455 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/t1_luts.h | 286 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/t2.c | 2221 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/t2.h | 76 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/tcd.c | 4194 ++--
Utilities/gdcmopenjpeg/src/lib/openjp2/tcd.h | 473 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/tgt.c | 501 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/tgt.h | 59 +-
.../gdcmopenjpeg/src/lib/openjp2/thix_manager.c | 170 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/thread.c | 952 +
Utilities/gdcmopenjpeg/src/lib/openjp2/thread.h | 256 +
.../src/lib/openjp2/{opj_inttypes.h => tls_keys.h} | 27 +-
.../gdcmopenjpeg/src/lib/openjp2/tpix_manager.c | 241 +-
Utilities/gdcmrle/info.h | 2 +-
Utilities/gdcmrle/io.h | 4 +-
Utilities/gdcmrle/rle.cxx | 6 +-
Utilities/gdcmuuid/CMakeLists.txt | 4 +-
Utilities/gdcmuuid/gen_uuid.c | 2 +-
Utilities/gdcmzlib/CMakeLists.txt | 4 +-
Utilities/getopt/CMakeLists.txt | 4 +-
Utilities/socketxx/CMakeLists.txt | 4 +-
Utilities/socketxx/socket++/CMakeLists.txt | 1 +
Utilities/socketxx/socket++/echo.cpp | 2 +-
Utilities/socketxx/socket++/echo.h | 12 +-
Utilities/socketxx/socket++/fork.cpp | 18 +-
Utilities/socketxx/socket++/fork.h | 9 +-
Utilities/socketxx/socket++/protocol.h | 6 +-
Utilities/socketxx/socket++/sockinet.cpp | 28 +-
Utilities/socketxx/socket++/sockinet.h | 28 +-
Utilities/socketxx/socket++/sockstream.cpp | 22 +-
Utilities/socketxx/socket++/sockstream.h | 40 +-
Wrapping/CMakeLists.txt | 10 +-
Wrapping/Csharp/CMakeLists.txt | 4 +
Wrapping/Csharp/gdcm.i | 1 +
Wrapping/Java/CMakeLists.txt | 7 +-
Wrapping/Python/CMakeLists.txt | 16 +-
Wrapping/Python/gdcmPythonFilter.cxx | 16 +-
Wrapping/Python/gdcmswig.i | 4 +
appveyor.yml | 23 +-
550 files changed, 54005 insertions(+), 40806 deletions(-)
delete mode 100644 CMake/FindJNI.cmake
mode change 100755 => 100644 Examples/Cxx/ReadAndDumpDICOMDIR2.cxx
rename README.txt => README.md (100%)
delete mode 100644 Source/DataStructureAndEncodingDefinition/gdcmCSAHeader.txx
create mode 100644 Source/MediaStorageAndFileFormat/gdcmEquipmentManufacturer.cxx
copy Source/{InformationObjectDefinition/gdcmStudy.h => MediaStorageAndFileFormat/gdcmEquipmentManufacturer.h} (63%)
create mode 100644 Testing/Source/MediaStorageAndFileFormat/Cxx/TestEquipmentManufacturer.cxx
copy Testing/Source/{DataStructureAndEncodingDefinition => MediaStorageAndFileFormat}/Java/CMakeLists.txt (87%)
create mode 100644 Testing/Source/MediaStorageAndFileFormat/Java/TestStringFilter.java
copy Utilities/Release/{release.sh => upload.sh} (56%)
create mode 100644 Utilities/gdcmcharls/charls.h
delete mode 100644 Utilities/gdcmcharls/config.h
delete mode 100644 Utilities/gdcmcharls/header.cpp
delete mode 100644 Utilities/gdcmcharls/header.h
delete mode 100644 Utilities/gdcmcharls/interface.h
create mode 100644 Utilities/gdcmcharls/jlscodecfactory.h
delete mode 100644 Utilities/gdcmcharls/jpegmarker.h
create mode 100644 Utilities/gdcmcharls/jpegmarkercode.h
create mode 100644 Utilities/gdcmcharls/jpegstreamreader.cpp
create mode 100644 Utilities/gdcmcharls/jpegstreamreader.h
create mode 100644 Utilities/gdcmcharls/styleanddesign.txt
create mode 100644 Utilities/gdcmopenjpeg/src/lib/openjp2/mqc_inl.h
copy Utilities/gdcmopenjpeg/src/lib/openjp2/{opj_inttypes.h => opj_common.h} (79%)
delete mode 100644 Utilities/gdcmopenjpeg/src/lib/openjp2/raw.c
delete mode 100644 Utilities/gdcmopenjpeg/src/lib/openjp2/raw.h
create mode 100644 Utilities/gdcmopenjpeg/src/lib/openjp2/sparse_array.c
create mode 100644 Utilities/gdcmopenjpeg/src/lib/openjp2/sparse_array.h
create mode 100644 Utilities/gdcmopenjpeg/src/lib/openjp2/thread.c
create mode 100644 Utilities/gdcmopenjpeg/src/lib/openjp2/thread.h
copy Utilities/gdcmopenjpeg/src/lib/openjp2/{opj_inttypes.h => tls_keys.h} (79%)
hooks/post-receive
--
Grassroots DICOM
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