Apprixmated maximum memory consumption: 481M writing new database writing clustering information program completed !
Total CPU time 80287.80 Index exceeds matrix dimensions.
Error in detectMITE (line 123) Sequence = genomeData(Number).Sequence(startPos:endPos);
Error in do_MITE_detection (line 141) detectMITE(data_file,p_TIR_Len,p_TSD_minLen ,p_TSD_maxLen ,p_MITE_minLen ,p_MITE_maxLen ,p_FlankSeq_Len,genome,p_cpu);
IdleTimeout has been reached. Parallel pool using the 'local' profile is shutting down.
FYI if you've got a problem with the program you could try submitting an issue under the "Tickets" tab. The developers appear to have answered those.
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Apprixmated maximum memory consumption: 481M
writing new database
writing clustering information
program completed !
Total CPU time 80287.80
Index exceeds matrix dimensions.
Error in detectMITE (line 123)
Sequence =
genomeData(Number).Sequence(startPos:endPos);
Error in do_MITE_detection (line 141)
detectMITE(data_file,p_TIR_Len,p_TSD_minLen ,p_TSD_maxLen ,p_MITE_minLen
,p_MITE_maxLen ,p_FlankSeq_Len,genome,p_cpu);
IdleTimeout has been reached.
Parallel pool using the 'local' profile is shutting down.
FYI if you've got a problem with the program you could try submitting an issue under the "Tickets" tab. The developers appear to have answered those.