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[Q2]: What does the description line mean in the output (in FASTA format) of detectMITE?

A: The description line of each MITE sequence (e.g., >6|2367817|2367964|2) has the following explanation:
>Chromosome|GenomicStartPosition| GenomicStopPosition |TSD_Length.
The description line of representative sequence of each MITE family (e.g., >6|2367817|2367964|2|109) has the following explanation:
>Chromosome|GenomicStartPosition| GenomicStopPosition |TSD_Length|CopyNumber.

Posted by Congting Ye 2015-10-13

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