danaides

Danaides stores meta-data from biological banks in a graph databases as well as OBO formatted ontologies.
It also provides a web query interface to parse ontologies or extract nodes based on ontology requirements.
Example: Get all known elements that are in family of Fish (species ontology) AND a RNA (sequence ontology).

Features

ontology query
custom bank creation
data indexation

Project Samples

Project Activity

See All Activity >

License

GNU General Public License version 3.0 (GPLv3)

Follow danaides

danaides Web Site

Other Useful Business Software

99.99% Uptime for MySQL and PostgreSQL Databases

Sub-second maintenance. 2x read/write performance. Built-in vector search for AI apps.

Cloud SQL Enterprise Plus delivers near-zero downtime with 35 days of point-in-time recovery. Supports MySQL, PostgreSQL, and SQL Server.

Start Free

Rate This Project

User Reviews

Be the first to post a review of danaides!

Additional Project Details

Languages

English

Intended Audience

Science/Research

Programming Language

Java, JavaScript

Related Categories

JavaScript Bio-Informatics Software, Java Bio-Informatics Software

Registered

2011-11-21

Similar Business Software

OmnibusX

In the world of biological data science, navigating vast and complex datasets can be a daunting task. Our software toolkit is designed to empower you by accelerating analysis, promoting accessibility, and providing comprehensive visualization tools to help you make sense of these intricate...

See Software
BioTuring Browser

Explore hundreds of curated single-cell transcriptome datasets, along with your own data, through interactive visualizations and analytics. The software also supports multimodal omics, CITE-seq, TCR-seq, and spatial transcriptomic. Interactively explore the world's largest single-cell expression...

See Software
Geneious

Geneious Prime makes bioinformatics accessible by transforming raw data into visualizations that make sequence analysis intuitive and user-friendly. Simple sequence assembly and easy editing of contigs. Automatic annotation for gene prediction, motifs, translation, and variant calling. Genotype...

See Software
MEGA

MEGA (Molecular Evolutionary Genetics Analysis) is a powerful and user-friendly software suite designed for analyzing DNA and protein sequence data from species and populations. It facilitates both automatic and manual sequence alignment, phylogenetic tree inference, and evolutionary hypothesis...

See Software
Nygen

Nygen is a cloud-based single-cell RNA-seq (scRNA-seq) and multi-omics data analysis and discovery platform designed to let researchers upload, explore, visualize, analyze and interpret complex cellular datasets with an intuitive, no-code interface that supports drag-and-drop workflows and...

See Software
Galaxy

Galaxy is an open source, web-based platform for data-intensive biomedical research. If you are new to Galaxy start here or consult our help resources. You can install your own Galaxy by following the tutorial and choosing from thousands of tools from the tool shed. This instance of Galaxy is...

See Software