If it's possible to read fasta files in .gz format, that would be a nice feature to add, especially since we already read spectrum files in .gz format.
--- old+++ new@@ -1,3 +1 @@If it's possible to read fasta files in .gz format, that would be a nice feature to add, especially since we already read spectrum files in .gz format.
--This is not high priority, though.
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Kaipo reported that making this change would require changing the parsing code in Crux. Our FASTA parsing is line-based, and apparently the Boost .gz reading interface doesn't work well with this. I am demoting this issue because it's not important enough to warrant the extra effort at this time.
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Diff:
Kaipo reported that making this change would require changing the parsing code in Crux. Our FASTA parsing is line-based, and apparently the Boost .gz reading interface doesn't work well with this. I am demoting this issue because it's not important enough to warrant the extra effort at this time.