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ubuntu compilation issue with

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Anonymous
2013-05-29
2013-05-29
  • Anonymous

    Anonymous - 2013-05-29

    Greetings,

    I am bumping into a compilation crash:
    "utilities.h:1695:23: fatal error: atlas_aux.h: No such file or directory"

    After some searching, it appears that on the latest ubuntu (13.04, 12.04) this header file does not exist anymore ("apt-cache search atlas_aux.h" gives no results). Has anyone being able to compile codonPhyml on a recent ubuntu ?

    Thanks,

    Tristan Lefebure

     
    • Marcelo  S Zanetti

      Hi
      There are two options:
      1- install the package libatlas-headers
      2- compile with make_phyml_omp or make_phyml script which does not enable BLAS/LAPACK
      Let me know.
      Best
      Marcelo

       
  • Tristan Lefebure

    Thanks Marcelo,

    Option #1 does not apply on ubuntu 13.04 (no package libatlas-headers), but option #2 worked !

    Best,

    Tristan

     
    • Marcelo  S Zanetti

      Cool!

      The package is not available via apt-get ... but you can force the install via the .deb version of older dist ... I think it does not generate conflicts ... tried once and worked ... try the link and let me know please

      http://launchpadlibrarian.net/36608370/libatlas-headers_3.6.0-24ubuntu1_all.deb

       

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