Run CFM-ID in ubuntu
Competitive Fragmentation Modeling for Metabolite Identification
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felicityallen
I have successfully installed cfm id to my ubuntu machine. Executable files have created in bin folder. Then I open command prompt in bin folder and tried to run as described in commandline utilities. But it said command ot found error.
Command :
~/CFMID/cfm-id-code/cfm/bin$ fraggraph-gen.exe CC 2 + fullgraph
fraggraph-gen.exe: command not found.
How can I run it on ubuntu?
Try ./fraggraph-gen.exe (i.e. put a ./ in front) Or alternatively add the directory with the cfm executables to your path.