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survival

Keith Ching
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survival_EGFR.png (88238 bytes)

[Instructions]

[survival] : Plot survival plots (TCGA only)

YouTube demo
Example: Is the expression level of EGFR associated with survival in TCGA-LUAD?

Choose Survival. Select TCGA-LUAD-RSEM expression set. Select TCGA-LUAD metadata source. Enter EGFR into hugo box. Press SUBMIT. ( If you do not enter a gene symbol, ALL genes will be tested and a ranked list of genes will be returned. This query will be slow. )

egfr
For stratified KM, the first and last quartiles of expression are used.


Related

Wiki: Instructions
Wiki: survival