[Cdk-commits] CVS: cdk/src jmol.javafiles,1.1,1.2

[Egon W. <eg...@us...>]

Update of /cvsroot/cdk/cdk/src
In directory sc8-pr-cvs1:/tmp/cvs-serv2895/src

Modified Files:
	jmol.javafiles 
Log Message:
Ported Jmol code for detecting wether two atoms are within bonding distance

Index: jmol.javafiles
===================================================================
RCS file: /cvsroot/cdk/cdk/src/jmol.javafiles,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- jmol.javafiles	21 Feb 2003 17:06:40 -0000	1.1
+++ jmol.javafiles	26 Apr 2003 20:54:29 -0000	1.2
@@ -2,6 +2,7 @@
 org/openscience/cdk/Atom.java
 org/openscience/cdk/AtomType.java
 org/openscience/cdk/Bond.java
+org/openscience/cdk/ChemFile.java
 org/openscience/cdk/ChemObject.java
 org/openscience/cdk/ChemObjectListener.java
 org/openscience/cdk/ChemSequence.java
@@ -10,10 +11,6 @@
 org/openscience/cdk/Isotope.java
 org/openscience/cdk/Molecule.java
 org/openscience/cdk/SetOfMolecules.java
-org/openscience/cdk/renderer/color/AtomColorer.java
-org/openscience/cdk/renderer/color/PartialAtomicChargeColors.java
-org/openscience/cdk/tools/IsotopeFactory.java
-org/openscience/cdk/tools/LoggingTool.java
 org/openscience/cdk/io/cml/cdopi/CDOInterface.java
 org/openscience/cdk/io/cml/cdopi/CDOAcceptedObjects.java
 org/openscience/cdk/io/cml/cdopi/ANIMATIONCDO.java
@@ -29,6 +26,10 @@
 org/openscience/cdk/io/cml/PDBConvention.java
 org/openscience/cdk/io/cml/PMPConvention.java
 org/openscience/cdk/io/cml/XMLHandler.java
-org/openscience/cdk/ChemFile.java
+org/openscience/cdk/geometry/BondTools.java
+org/openscience/cdk/renderer/color/AtomColorer.java
+org/openscience/cdk/renderer/color/PartialAtomicChargeColors.java
+org/openscience/cdk/tools/IsotopeFactory.java
+org/openscience/cdk/tools/LoggingTool.java
 org/openscience/cdk/tools/AtomTypeFactory.java
 org/openscience/cdk/tools/TXTBasedAtomTypeConfigurator.java