[Cdk-commits] CVS: cdk/src/org/openscience/cdk/test AtomEnumerationTest.java,NONE,1.1 AtomTypeTest.java,NONE,1.1 BioPolymerTest.java,NONE,1.1 BondTest.java,NONE,1.1 ChemModelTest.java,NONE,1.1 ChemSequenceTest.java,NONE,1.1 CrystalTest.java,NONE,1.1 ElectronContainerTest.java,NONE,1.1 ElementTest.java,NONE,1.1 IsotopeTest.java,NONE,1.1 MoleculeTest.java,NONE,1.1 RingSetTest.java,NONE,1.1 RingTest.java,NONE,1.1 SetOfMoleculesTest.java,NONE,1.1 AtomContainerTest.java,1.3,1.4 CoreClassesTests.java,1.4,1.5

[Egon W. <eg...@us...>]

Update of /cvsroot/cdk/cdk/src/org/openscience/cdk/test
In directory sc8-pr-cvs1:/tmp/cvs-serv11180/src/org/openscience/cdk/test

Modified Files:
	AtomContainerTest.java CoreClassesTests.java 
Added Files:
	AtomEnumerationTest.java AtomTypeTest.java BioPolymerTest.java 
	BondTest.java ChemModelTest.java ChemSequenceTest.java 
	CrystalTest.java ElectronContainerTest.java ElementTest.java 
	IsotopeTest.java MoleculeTest.java RingSetTest.java 
	RingTest.java SetOfMoleculesTest.java 
Log Message:
Added missing JUnit test for core classes.


--- NEW FILE: AtomEnumerationTest.java ---
/* $RCSfile: AtomEnumerationTest.java,v $
 * $Author: egonw $    
 * $Date: 2002/12/26 22:34:06 $    
 * $Revision: 1.1 $
 * 
 * Copyright (C) 1997-2002  The Chemistry Development Kit (CDK) project
 * 
 * Contact: ste...@ic..., gez...@ma..., eg...@sc...
 * 
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU Lesser General Public License
 * as published by the Free Software Foundation; either version 2.1
 * of the License, or (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU Lesser General Public License for more details.
 * 
 * You should have received a copy of the GNU Lesser General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA. 
 * 
 */

package org.openscience.cdk.test;

import org.openscience.cdk.*;
import java.util.*;
import junit.framework.*;
import javax.vecmath.*;

/**
 * Checks the funcitonality of the AtomEnumeration class.
 *
 * @see org.openscience.cdk.AtomEnumeration
 */
public class AtomEnumerationTest extends TestCase {

    public AtomEnumerationTest(String name) {
        super(name);
    }

    public void setUp() {}

    public static Test suite() {
        return new TestSuite(AtomEnumerationTest.class);
    }
}

--- NEW FILE: AtomTypeTest.java ---
/* $RCSfile: AtomTypeTest.java,v $
 * $Author: egonw $    
 * $Date: 2002/12/26 22:34:06 $    
 * $Revision: 1.1 $
 * 
 * Copyright (C) 1997-2002  The Chemistry Development Kit (CDK) project
 * 
 * Contact: ste...@ic..., gez...@ma..., eg...@sc...
 * 
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU Lesser General Public License
 * as published by the Free Software Foundation; either version 2.1
 * of the License, or (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU Lesser General Public License for more details.
 * 
 * You should have received a copy of the GNU Lesser General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA. 
 * 
 */

package org.openscience.cdk.test;

import org.openscience.cdk.*;
import java.util.*;
import junit.framework.*;
import javax.vecmath.*;

/**
 * Checks the funcitonality of the AtomType class.
 *
 * @see org.openscience.cdk.AtomType
 */
public class AtomTypeTest extends TestCase {

    public AtomTypeTest(String name) {
        super(name);
    }

    public void setUp() {}

    public static Test suite() {
        return new TestSuite(AtomTypeTest.class);
    }
}

--- NEW FILE: BioPolymerTest.java ---
/* $RCSfile: BioPolymerTest.java,v $
 * $Author: egonw $    
 * $Date: 2002/12/26 22:34:07 $    
 * $Revision: 1.1 $
 * 
 * Copyright (C) 1997-2002  The Chemistry Development Kit (CDK) project
 * 
 * Contact: ste...@ic..., gez...@ma..., eg...@sc...
 * 
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU Lesser General Public License
 * as published by the Free Software Foundation; either version 2.1
 * of the License, or (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU Lesser General Public License for more details.
 * 
 * You should have received a copy of the GNU Lesser General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA. 
 * 
 */

package org.openscience.cdk.test;

import org.openscience.cdk.*;
import java.util.*;
import junit.framework.*;
import javax.vecmath.*;

/**
 * Checks the funcitonality of the BioPolymer class.
 *
 * @see org.openscience.cdk.BioPolymer
 */
public class BioPolymerTest extends TestCase {

    public BioPolymerTest(String name) {
        super(name);
    }

    public void setUp() {}

    public static Test suite() {
        return new TestSuite(BioPolymerTest.class);
    }
}

--- NEW FILE: BondTest.java ---
/* $RCSfile: BondTest.java,v $
 * $Author: egonw $    
 * $Date: 2002/12/26 22:34:07 $    
 * $Revision: 1.1 $
 * 
 * Copyright (C) 1997-2002  The Chemistry Development Kit (CDK) project
 * 
 * Contact: ste...@ic..., gez...@ma..., eg...@sc...
 * 
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU Lesser General Public License
 * as published by the Free Software Foundation; either version 2.1
 * of the License, or (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU Lesser General Public License for more details.
 * 
 * You should have received a copy of the GNU Lesser General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA. 
 * 
 */

package org.openscience.cdk.test;

import org.openscience.cdk.*;
import java.util.*;
import junit.framework.*;
import javax.vecmath.*;

/**
 * Checks the funcitonality of the Bond class.
 *
 * @see org.openscience.cdk.Bond
 */
public class BondTest extends TestCase {

    public BondTest(String name) {
        super(name);
    }

    public void setUp() {}

    public static Test suite() {
        return new TestSuite(BondTest.class);
    }
    
    public void testCompare() {
        Atom c = new Atom("C");
        Atom o = new Atom("O");
        
        Bond b = new Bond(c, o, 2.0); // C=O bond
        Bond b2 = new Bond(c, o, 2.0); // same C=O bond
        
        assertTrue(b.compare(b2));
    }
    
    public void testContains() {
        Atom c = new Atom("C");
        Atom o = new Atom("O");
        
        Bond b = new Bond(c, o, 2.0); // C=O bond
        
        assertTrue(b.contains(c));
        assertTrue(b.contains(o));
    }
    
    public void testGetAtomCount() {
        Atom c = new Atom("C");
        Atom o = new Atom("O");
        
        Bond b = new Bond(c, o, 2.0); // C=O bond
        
        assertTrue(2.0 == b.getAtomCount());
    }
    
    public void testGetAtoms() {
        Atom c = new Atom("C");
        Atom o = new Atom("O");
        
        Bond b = new Bond(c, o, 2.0); // C=O bond
        
        Atom[] atoms = b.getAtoms();
        assertTrue(2.0 == atoms.length);
        assertEquals(c, atoms[0]);
        assertEquals(o, atoms[1]);
    }
    
    public void testGetConnectedAtom() {
        Atom c = new Atom("C");
        Atom o = new Atom("O");
        
        Bond b = new Bond(c, o, 2.0); // C=O bond
        
        assertEquals(c, b.getConnectedAtom(o));
        assertEquals(o, b.getConnectedAtom(c));
    }
    
    public void testGetOrder() {
        Atom c = new Atom("C");
        Atom o = new Atom("O");
        
        Bond b = new Bond(c, o, 2.0); // C=O bond
        
        assertTrue(2.0 == b.getOrder());
        
        b.setOrder(400.0);
        assertTrue(400.0 == b.getOrder());
    }
    
}

--- NEW FILE: ChemModelTest.java ---
/* $RCSfile: ChemModelTest.java,v $
 * $Author: egonw $    
 * $Date: 2002/12/26 22:34:07 $    
 * $Revision: 1.1 $
 * 
 * Copyright (C) 1997-2002  The Chemistry Development Kit (CDK) project
 * 
 * Contact: ste...@ic..., gez...@ma..., eg...@sc...
 * 
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU Lesser General Public License
 * as published by the Free Software Foundation; either version 2.1
 * of the License, or (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU Lesser General Public License for more details.
 * 
 * You should have received a copy of the GNU Lesser General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA. 
 * 
 */

package org.openscience.cdk.test;

import org.openscience.cdk.*;
import java.util.*;
import junit.framework.*;
import javax.vecmath.*;

/**
 * Checks the funcitonality of the ChemModel class.
 *
 * @see org.openscience.cdk.ChemModel
 */
public class ChemModelTest extends TestCase {

    public ChemModelTest(String name) {
        super(name);
    }

    public void setUp() {}

    public static Test suite() {
        return new TestSuite(ChemModelTest.class);
    }
}

--- NEW FILE: ChemSequenceTest.java ---
/* $RCSfile: ChemSequenceTest.java,v $
 * $Author: egonw $    
 * $Date: 2002/12/26 22:34:07 $    
 * $Revision: 1.1 $
 * 
 * Copyright (C) 1997-2002  The Chemistry Development Kit (CDK) project
 * 
 * Contact: ste...@ic..., gez...@ma..., eg...@sc...
 * 
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU Lesser General Public License
 * as published by the Free Software Foundation; either version 2.1
 * of the License, or (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU Lesser General Public License for more details.
 * 
 * You should have received a copy of the GNU Lesser General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA. 
 * 
 */

package org.openscience.cdk.test;

import org.openscience.cdk.*;
import java.util.*;
import junit.framework.*;
import javax.vecmath.*;

/**
 * Checks the funcitonality of the ChemSequence class.
 *
 * @see org.openscience.cdk.ChemSequence
 */
public class ChemSequenceTest extends TestCase {

    public ChemSequenceTest(String name) {
        super(name);
    }

    public void setUp() {}

    public static Test suite() {
        return new TestSuite(ChemSequenceTest.class);
    }
}

--- NEW FILE: CrystalTest.java ---
/* $RCSfile: CrystalTest.java,v $
 * $Author: egonw $    
 * $Date: 2002/12/26 22:34:07 $    
 * $Revision: 1.1 $
 * 
 * Copyright (C) 1997-2002  The Chemistry Development Kit (CDK) project
 * 
 * Contact: ste...@ic..., gez...@ma..., eg...@sc...
 * 
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU Lesser General Public License
 * as published by the Free Software Foundation; either version 2.1
 * of the License, or (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU Lesser General Public License for more details.
 * 
 * You should have received a copy of the GNU Lesser General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA. 
 * 
 */

package org.openscience.cdk.test;

import org.openscience.cdk.*;
import java.util.*;
import junit.framework.*;
import javax.vecmath.*;

/**
 * Checks the funcitonality of the Crystal.
 */
public class CrystalTest extends TestCase {

    public CrystalTest(String name) {
        super(name);
    }

    public void setUp() {}

    public static Test suite() {
        return new TestSuite(CrystalTest.class);
    }

    public void testSetABC() {
        Crystal crystal = new Crystal();
        
        crystal.setA(1.0, 2.0, 3.0);
        double[] a = crystal.getA();
        assertTrue(1.0 == a[0]);
        assertTrue(2.0 == a[1]);
        assertTrue(3.0 == a[2]);
        
        crystal.setB(1.0, 2.0, 3.0);
        double[] b = crystal.getB();
        assertTrue(1.0 == b[0]);
        assertTrue(2.0 == b[1]);
        assertTrue(3.0 == b[2]);

        crystal.setC(1.0, 2.0, 3.0);
        double[] c = crystal.getC();
        assertTrue(1.0 == c[0]);
        assertTrue(2.0 == c[1]);
        assertTrue(3.0 == c[2]);
    }
    
    public void testSetSpaceGroup() {
        Crystal crystal = new Crystal();
        crystal.setSpaceGroup("P 2_1 2_1 2_1");
        assertEquals("P 2_1 2_1 2_1", crystal.getSpaceGroup());
        
        assertEquals(4, crystal.getZ());
    }

    public void testGetP1Cell() {
        Crystal crystal = new Crystal();
        crystal.addAtom(new Atom("C"));
        crystal.addAtom(new Atom("C"));
        crystal.addAtom(new Atom("C"));
        
        crystal.setSpaceGroup("P 2_1 2_1 2_1");
        Crystal p1 = crystal.getP1Cell();
        assertEquals(12, p1.getAtomCount());
    }

}

--- NEW FILE: ElectronContainerTest.java ---
/* $RCSfile: ElectronContainerTest.java,v $
 * $Author: egonw $    
 * $Date: 2002/12/26 22:34:07 $    
 * $Revision: 1.1 $
 * 
 * Copyright (C) 1997-2002  The Chemistry Development Kit (CDK) project
 * 
 * Contact: ste...@ic..., gez...@ma..., eg...@sc...
 * 
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU Lesser General Public License
 * as published by the Free Software Foundation; either version 2.1
 * of the License, or (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU Lesser General Public License for more details.
 * 
 * You should have received a copy of the GNU Lesser General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA. 
 * 
 */

package org.openscience.cdk.test;

import org.openscience.cdk.*;
import java.util.*;
import junit.framework.*;
import javax.vecmath.*;

/**
 * Checks the funcitonality of the ElectronContainer class.
 *
 * @see org.openscience.cdk.ElectronContainer
 */
public class ElectronContainerTest extends TestCase {

    public ElectronContainerTest(String name) {
        super(name);
    }

    public void setUp() {}

    public static Test suite() {
        return new TestSuite(ElectronContainerTest.class);
    }
}

--- NEW FILE: ElementTest.java ---
/* $RCSfile: ElementTest.java,v $
 * $Author: egonw $    
 * $Date: 2002/12/26 22:34:07 $    
 * $Revision: 1.1 $
 * 
 * Copyright (C) 1997-2002  The Chemistry Development Kit (CDK) project
 * 
 * Contact: ste...@ic..., gez...@ma..., eg...@sc...
 * 
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU Lesser General Public License
 * as published by the Free Software Foundation; either version 2.1
 * of the License, or (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU Lesser General Public License for more details.
 * 
 * You should have received a copy of the GNU Lesser General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA. 
 * 
 */

package org.openscience.cdk.test;

import org.openscience.cdk.*;
import java.util.*;
import junit.framework.*;
import javax.vecmath.*;

/**
 * Checks the funcitonality of the Element class.
 *
 * @see org.openscience.cdk.Element
 */
public class ElementTest extends TestCase {

    public ElementTest(String name) {
        super(name);
    }

    public void setUp() {}

    public static Test suite() {
        return new TestSuite(ElementTest.class);
    }
}

--- NEW FILE: IsotopeTest.java ---
/* $RCSfile: IsotopeTest.java,v $
 * $Author: egonw $    
 * $Date: 2002/12/26 22:34:07 $    
 * $Revision: 1.1 $
 * 
 * Copyright (C) 1997-2002  The Chemistry Development Kit (CDK) project
 * 
 * Contact: ste...@ic..., gez...@ma..., eg...@sc...
 * 
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU Lesser General Public License
 * as published by the Free Software Foundation; either version 2.1
 * of the License, or (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU Lesser General Public License for more details.
 * 
 * You should have received a copy of the GNU Lesser General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA. 
 * 
 */

package org.openscience.cdk.test;

import org.openscience.cdk.*;
import java.util.*;
import junit.framework.*;
import javax.vecmath.*;

/**
 * Checks the funcitonality of the Isotope class.
 *
 * @see org.openscience.cdk.Isotope
 */
public class IsotopeTest extends TestCase {

    public IsotopeTest(String name) {
        super(name);
    }

    public void setUp() {}

    public static Test suite() {
        return new TestSuite(IsotopeTest.class);
    }
}

--- NEW FILE: MoleculeTest.java ---
/* $RCSfile: MoleculeTest.java,v $
 * $Author: egonw $    
 * $Date: 2002/12/26 22:34:07 $    
 * $Revision: 1.1 $
 * 
 * Copyright (C) 1997-2002  The Chemistry Development Kit (CDK) project
 * 
 * Contact: ste...@ic..., gez...@ma..., eg...@sc...
 * 
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU Lesser General Public License
 * as published by the Free Software Foundation; either version 2.1
 * of the License, or (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU Lesser General Public License for more details.
 * 
 * You should have received a copy of the GNU Lesser General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA. 
 * 
 */

package org.openscience.cdk.test;

import org.openscience.cdk.*;
import java.util.*;
import junit.framework.*;
import javax.vecmath.*;

/**
 * Checks the funcitonality of the Molecule class.
 *
 * @see org.openscience.cdk.Molecule
 */
public class MoleculeTest extends TestCase {

    public MoleculeTest(String name) {
        super(name);
    }

    public void setUp() {}

    public static Test suite() {
        return new TestSuite(MoleculeTest.class);
    }
}

--- NEW FILE: RingSetTest.java ---
/* $RCSfile: RingSetTest.java,v $
 * $Author: egonw $    
 * $Date: 2002/12/26 22:34:07 $    
 * $Revision: 1.1 $
 * 
 * Copyright (C) 1997-2002  The Chemistry Development Kit (CDK) project
 * 
 * Contact: ste...@ic..., gez...@ma..., eg...@sc...
 * 
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU Lesser General Public License
 * as published by the Free Software Foundation; either version 2.1
 * of the License, or (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU Lesser General Public License for more details.
 * 
 * You should have received a copy of the GNU Lesser General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA. 
 * 
 */

package org.openscience.cdk.test;

import org.openscience.cdk.*;
import java.util.*;
import junit.framework.*;
import javax.vecmath.*;

/**
 * Checks the funcitonality of the RingSet class.
 *
 * @see org.openscience.cdk.RingSet
 */
public class RingSetTest extends TestCase {

    public RingSetTest(String name) {
        super(name);
    }

    public void setUp() {}

    public static Test suite() {
        return new TestSuite(RingSetTest.class);
    }
}

--- NEW FILE: RingTest.java ---
/* $RCSfile: RingTest.java,v $
 * $Author: egonw $    
 * $Date: 2002/12/26 22:34:07 $    
 * $Revision: 1.1 $
 * 
 * Copyright (C) 1997-2002  The Chemistry Development Kit (CDK) project
 * 
 * Contact: ste...@ic..., gez...@ma..., eg...@sc...
 * 
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU Lesser General Public License
 * as published by the Free Software Foundation; either version 2.1
 * of the License, or (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU Lesser General Public License for more details.
 * 
 * You should have received a copy of the GNU Lesser General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA. 
 * 
 */

package org.openscience.cdk.test;

import org.openscience.cdk.*;
import java.util.*;
import junit.framework.*;
import javax.vecmath.*;

/**
 * Checks the funcitonality of the Ring class.
 *
 * @see org.openscience.cdk.Ring
 */
public class RingTest extends TestCase {

    public RingTest(String name) {
        super(name);
    }

    public void setUp() {}

    public static Test suite() {
        return new TestSuite(RingTest.class);
    }
}

--- NEW FILE: SetOfMoleculesTest.java ---
/* $RCSfile: SetOfMoleculesTest.java,v $
 * $Author: egonw $    
 * $Date: 2002/12/26 22:34:07 $    
 * $Revision: 1.1 $
 * 
 * Copyright (C) 1997-2002  The Chemistry Development Kit (CDK) project
 * 
 * Contact: ste...@ic..., gez...@ma..., eg...@sc...
 * 
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU Lesser General Public License
 * as published by the Free Software Foundation; either version 2.1
 * of the License, or (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU Lesser General Public License for more details.
 * 
 * You should have received a copy of the GNU Lesser General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA. 
 * 
 */

package org.openscience.cdk.test;

import org.openscience.cdk.*;
import java.util.*;
import junit.framework.*;
import javax.vecmath.*;

/**
 * Checks the funcitonality of the SetOfMolecules class.
 *
 * @see org.openscience.cdk.SetOfMolecules
 */
public class SetOfMoleculesTest extends TestCase {

    public SetOfMoleculesTest(String name) {
        super(name);
    }

    public void setUp() {}

    public static Test suite() {
        return new TestSuite(SetOfMoleculesTest.class);
    }
}

Index: AtomContainerTest.java
===================================================================
RCS file: /cvsroot/cdk/cdk/src/org/openscience/cdk/test/AtomContainerTest.java,v
retrieving revision 1.3
retrieving revision 1.4
diff -C2 -r1.3 -r1.4
*** AtomContainerTest.java	26 Dec 2002 07:52:27 -0000	1.3
--- AtomContainerTest.java	26 Dec 2002 22:34:06 -0000	1.4
***************
*** 1,4 ****
! /*
!  * $RCSfile$
   * $Author$    
   * $Date$    
--- 1,3 ----
! /* $RCSfile$
   * $Author$    
   * $Date$    

Index: CoreClassesTests.java
===================================================================
RCS file: /cvsroot/cdk/cdk/src/org/openscience/cdk/test/CoreClassesTests.java,v
retrieving revision 1.4
retrieving revision 1.5
diff -C2 -r1.4 -r1.5
*** CoreClassesTests.java	24 Dec 2002 21:04:46 -0000	1.4
--- CoreClassesTests.java	26 Dec 2002 22:34:07 -0000	1.5
***************
*** 35,43 ****
      public static Test suite () {
          TestSuite suite= new TestSuite("The cdk.core Tests");
-         suite.addTest(AtomTest.suite());
          suite.addTest(AtomContainerTest.suite());
          suite.addTest(ChemObjectTest.suite());
          suite.addTest(MonomerTest.suite());
          suite.addTest(PolymerTest.suite());
          return suite;
      }
--- 35,57 ----
      public static Test suite () {
          TestSuite suite= new TestSuite("The cdk.core Tests");
          suite.addTest(AtomContainerTest.suite());
+         suite.addTest(AtomEnumerationTest.suite());
+         suite.addTest(AtomTest.suite());
+         suite.addTest(AtomTypeTest.suite());
+         suite.addTest(BioPolymerTest.suite());
+         suite.addTest(BondTest.suite());
+         suite.addTest(ChemModelTest.suite());
          suite.addTest(ChemObjectTest.suite());
+         suite.addTest(ChemSequenceTest.suite());
+         suite.addTest(CrystalTest.suite());
+         suite.addTest(ElectronContainerTest.suite());
+         suite.addTest(ElementTest.suite());
+         suite.addTest(IsotopeTest.suite());
+         suite.addTest(MoleculeTest.suite());
          suite.addTest(MonomerTest.suite());
          suite.addTest(PolymerTest.suite());
+         suite.addTest(RingTest.suite());
+         suite.addTest(RingSetTest.suite());
+         suite.addTest(SetOfMoleculesTest.suite());
          return suite;
      }