[Cdk-commits] CVS: cdk/org/openscience/cdk/io ChemFileCDO.java,1.15,1.16

[Egon W. <eg...@us...>]

Update of /cvsroot/cdk/cdk/org/openscience/cdk/io
In directory usw-pr-cvs1:/tmp/cvs-serv17724/openscience/cdk/io

Modified Files:
	ChemFileCDO.java 
Log Message:
Worked on database support:
- separated indices from CML content
- CML files are inserted instead of MDL Mol 
  (cdk/applications/DBInsert.java should be written)
- PostGreSQL tested and is not working, because SQL command differ much
  (this is being looked in to)
- Use of logger facilities


Index: ChemFileCDO.java
===================================================================
RCS file: /cvsroot/cdk/cdk/org/openscience/cdk/io/ChemFileCDO.java,v
retrieving revision 1.15
retrieving revision 1.16
diff -C2 -r1.15 -r1.16
*** ChemFileCDO.java	2001/10/15 17:39:38	1.15
--- ChemFileCDO.java	2001/12/26 20:52:07	1.16
***************
*** 8,12 ****
   * 
   * Contact: ste...@ic..., gez...@ma..., eg...@sc...
!  * 
   * This program is free software; you can redistribute it and/or
   * modify it under the terms of the GNU Lesser General Public License
--- 8,12 ----
   * 
   * Contact: ste...@ic..., gez...@ma..., eg...@sc...
!  *
   * This program is free software; you can redistribute it and/or
   * modify it under the terms of the GNU Lesser General Public License
***************
*** 121,125 ****
          addChemSequence(currentChemSequence);
          logger.info("This file has " + getChemSequenceCount() + " sequence(s).");
!         logger.info("Molecule added: \n" + currentMolecule.toString());
        } else if (objectType.equals("Atom")) {
          currentMolecule.addAtom(currentAtom);
--- 121,125 ----
          addChemSequence(currentChemSequence);
          logger.info("This file has " + getChemSequenceCount() + " sequence(s).");
!         // logger.info("Molecule added: \n" + currentMolecule.toString());
        } else if (objectType.equals("Atom")) {
          currentMolecule.addAtom(currentAtom);