[Cdk-commits] [cdk/cdk] e2eb00: Resolution for Bug 3485634

[GitHub <no...@gi...>]

  Branch: refs/heads/cdk-1.4.x
  Home:   https://github.com/cdk/cdk
  Commit: e2eb0075ed7ca46353b3e7e43509028114e7d4d0
      https://github.com/cdk/cdk/commit/e2eb0075ed7ca46353b3e7e43509028114e7d4d0
  Author: John May <joh...@gm...>
  Date:   2012-02-19 (Sun, 19 Feb 2012)

  Changed paths:
    M src/main/org/openscience/cdk/io/MDLReader.java
  M src/main/org/openscience/cdk/io/MDLV2000Reader.java
  A src/test/data/mdl/bug3485634.mol
  M src/test/org/openscience/cdk/io/MDLReaderTest.java
  M src/test/org/openscience/cdk/io/MDLV2000ReaderTest.java

  Log Message:
  -----------
  Resolution for Bug 3485634

Adding test molecule data/mdl/bug3585634.mol. This molecule is from the
metlin database (http://metlin.scripps.edu/)

1) MDLReader and MDLV2000Reader unit tests
   Unit test's to ensure the molecule is read.

2) MDLV2000Reader empty atom properties fix
   Fix allows MDLV2000Reader to read mol (v2000) files that are missing
   all atom properties

3) MDLReader empty atom properties fix
   Fix allows MDLReader to reader mol files with empty atom properties

4) Corrected error handling in MDLV2000Reader and MDLReader
   Handling now uses the handleError() method to respond correctly
   to format violations

Change-Id: I69f96635dd42753f4464426bd4b083417f62f74e
Signed-off-by: Egon Willighagen <eg...@us...>