[Breakdancer-help] Break Dancer input file

[Lynnette F. <Lyn...@nf...>]

Hello,

 

I am trying to use BreakDancer in a bam file from Bowtie + TopHat alignment
but I am not able to create the configuration list. Is Breakdancer accepting
these programs? 

 

Best,

 

Lynnette

 

 

Lynnette Fernandez Cuesta, Ph.D. 
Postdoctoral fellow, Thomas Lab 
Max Planck Institute for neurological research 
Lyn...@nf... 
Tlf: 0049   0  221 4726 613