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#236 Bowtie 2 - un-conc flag reduces performance

pending
nobody
None
5
2012-12-16
2012-08-22
Anonymous
No

bowtie2 version beta7

Specifying the "un-conc" flag dramatically reduces the speed of bowtie2 alignments when multiple threads are used.

Discussion

  • Ben Langmead

    Ben Langmead - 2012-12-16

    Please try again with version 2.0.3 and let me know if you're still seeing noticeable slowdown. I made this much more efficient in the 2.0.3 release.

    Thanks,
    Ben

     

  • Ben Langmead

    Ben Langmead - 2012-12-16
    • status: open --> pending
     

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