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Lexical error at line 1, column 8 while trying to load data from python

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2017-02-23
2017-02-23
  • SUNIL CHINNAMGARI

    I am new to blazegraph and sparql. I am trying to load triples to blazegraph namespace through python with the code below -

    from pymantic import sparql
    server = sparql.SPARQLServer('http://10.167.97.224:9999/blazegraph/sparql')
    server.update('load C:\Users\a571410\Desktop\schema.nt')

    It ended up in an error below -

    SPARQLQueryException: {'transfer-encoding': 'chunked', 'status': '400', 'content-type': 'text/plain', 'server': 'Jetty(9.2.z-SNAPSHOT)'}: SPARQL-UPDATE: updateStr=load C:\Users\a571410\Desktop\schema.nt
    java.util.concurrent.ExecutionException: org.openrdf.query.MalformedQueryException: Lexical error at line 1, column 8. Encountered: "\" (92), after : ""
    at java.util.concurrent.FutureTask.report(Unknown Source)
    at java.util.concurrent.FutureTask.get(Unknown Source)
    at com.bigdata.rdf.sail.webapp.BigdataServlet.submitApiTask(BigdataServlet.java:281)
    at com.bigdata.rdf.sail.webapp.QueryServlet.doSparqlUpdate(QueryServlet.java:448)
    at com.bigdata.rdf.sail.webapp.QueryServlet.doPost(QueryServlet.java:229)
    at com.bigdata.rdf.sail.webapp.RESTServlet.doPost(RESTServlet.java:269)
    at javax.servlet.http.HttpServlet.service(HttpServlet.java:707)
    at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
    at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:769)
    at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:585)
    at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
    at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:577)
    at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:223)
    at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1125)
    at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:515)
    at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:185)
    at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1059)
    at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
    at org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:215)
    at org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:110)
    at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:97)
    at org.eclipse.jetty.server.Server.handle(Server.java:497)
    at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:311)
    at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:248)
    at org.eclipse.jetty.io.AbstractConnection$2.run(AbstractConnection.java:540)
    at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:610)
    at org.eclipse.jetty.util.thread.QueuedThreadPool$3.run(QueuedThreadPool.java:539)
    at java.lang.Thread.run(Unknown Source)
    Caused by: org.openrdf.query.MalformedQueryException: Lexical error at line 1, column 8. Encountered: "\" (92), after : ""
    at com.bigdata.rdf.sail.sparql.Bigdata2ASTSPARQLParser.parseUpdate2(Bigdata2ASTSPARQLParser.java:307)
    at com.bigdata.rdf.sail.webapp.QueryServlet$SparqlUpdateTask.call(QueryServlet.java:521)
    at com.bigdata.rdf.sail.webapp.QueryServlet$SparqlUpdateTask.call(QueryServlet.java:460)
    at com.bigdata.rdf.task.ApiTaskForIndexManager.call(ApiTaskForIndexManager.java:68)
    at java.util.concurrent.FutureTask.run(Unknown Source)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
    ... 1 more
    Caused by: com.bigdata.rdf.sail.sparql.ast.TokenMgrError: Lexical error at line 1, column 8. Encountered: "\" (92), after : ""
    at com.bigdata.rdf.sail.sparql.ast.SyntaxTreeBuilderTokenManager.getNextToken(SyntaxTreeBuilderTokenManager.java:3994)
    at com.bigdata.rdf.sail.sparql.ast.SyntaxTreeBuilder.jj_ntk(SyntaxTreeBuilder.java:9633)
    at com.bigdata.rdf.sail.sparql.ast.SyntaxTreeBuilder.Load(SyntaxTreeBuilder.java:8020)
    at com.bigdata.rdf.sail.sparql.ast.SyntaxTreeBuilder.Update(SyntaxTreeBuilder.java:7867)
    at com.bigdata.rdf.sail.sparql.ast.SyntaxTreeBuilder.UpdateContainer(SyntaxTreeBuilder.java:174)
    at com.bigdata.rdf.sail.sparql.ast.SyntaxTreeBuilder.UpdateSequence(SyntaxTreeBuilder.java:116)
    at com.bigdata.rdf.sail.sparql.ast.SyntaxTreeBuilder.parseUpdateSequence(SyntaxTreeBuilder.java:49)
    at com.bigdata.rdf.sail.sparql.Bigdata2ASTSPARQLParser.parseUpdate2(Bigdata2ASTSPARQLParser.java:185)
    ... 7 more

    Query: load C:\Users\a571410\Desktop\schema.nt

    Can someone help guide on how to progress further? I could find any solutions on google for this specific problem

     
    • Bryan Thompson

      Bryan Thompson - 2017-02-23

      The syntax for LOAD is defined at [1]. The IRIRef production (for the
      source data) is defined as [2].

      You need to specify something like LOAD <file: c:="" ...="">

      The angle brackets indicate a URI.

      The URI needs to be a URI (in your case) in the local file system (since
      that is where the file is).

      Thanks,
      Bryan

      [1] https://www.w3.org/TR/sparql11-update/#load
      [2]
      IRIREF ::= '<' ([^<>"{}|^`]-[#x00-#x20])* '>'

      On Thu, Feb 23, 2017 at 1:58 AM, SUNIL CHINNAMGARI <happylife80@users.sf.net

      wrote:

      I am new to blazegraph and sparql. I am trying to load triples to
      blazegraph namespace through python with the code below -

      from pymantic import sparql
      server = sparql.SPARQLServer('http://10.167.97.224:9999/blazegraph/sparql
      ')
      server.update('load C:\Users\a571410\Desktop\schema.nt')

      It ended up in an error below -

      SPARQLQueryException: {'transfer-encoding': 'chunked', 'status': '400',
      'content-type': 'text/plain', 'server': 'Jetty(9.2.z-SNAPSHOT)'}:
      SPARQL-UPDATE: updateStr=load C:\Users\a571410\Desktop\schema.nt
      java.util.concurrent.ExecutionException: org.openrdf.query.MalformedQueryException:
      Lexical error at line 1, column 8. Encountered: "\" (92), after : ""
      at java.util.concurrent.FutureTask.report(Unknown Source)
      at java.util.concurrent.FutureTask.get(Unknown Source)
      at com.bigdata.rdf.sail.webapp.BigdataServlet.submitApiTask(
      BigdataServlet.java:281)
      at com.bigdata.rdf.sail.webapp.QueryServlet.doSparqlUpdate(
      QueryServlet.java:448)
      at com.bigdata.rdf.sail.webapp.QueryServlet.doPost(QueryServlet.java:229)
      at com.bigdata.rdf.sail.webapp.RESTServlet.doPost(RESTServlet.java:269)
      at javax.servlet.http.HttpServlet.service(HttpServlet.java:707)
      at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
      at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:769)
      at org.eclipse.jetty.servlet.ServletHandler.doHandle(
      ServletHandler.java:585)
      at org.eclipse.jetty.server.handler.ScopedHandler.handle(
      ScopedHandler.java:143)
      at org.eclipse.jetty.security.SecurityHandler.handle(
      SecurityHandler.java:577)
      at org.eclipse.jetty.server.session.SessionHandler.
      doHandle(SessionHandler.java:223)
      at org.eclipse.jetty.server.handler.ContextHandler.
      doHandle(ContextHandler.java:1125)
      at org.eclipse.jetty.servlet.ServletHandler.doScope(
      ServletHandler.java:515)
      at org.eclipse.jetty.server.session.SessionHandler.
      doScope(SessionHandler.java:185)
      at org.eclipse.jetty.server.handler.ContextHandler.
      doScope(ContextHandler.java:1059)
      at org.eclipse.jetty.server.handler.ScopedHandler.handle(
      ScopedHandler.java:141)
      at org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(
      ContextHandlerCollection.java:215)
      at org.eclipse.jetty.server.handler.HandlerCollection.
      handle(HandlerCollection.java:110)
      at org.eclipse.jetty.server.handler.HandlerWrapper.handle(
      HandlerWrapper.java:97)
      at org.eclipse.jetty.server.Server.handle(Server.java:497)
      at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:311)
      at org.eclipse.jetty.server.HttpConnection.onFillable(
      HttpConnection.java:248)
      at org.eclipse.jetty.io.AbstractConnection$2.run(
      AbstractConnection.java:540)
      at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(
      QueuedThreadPool.java:610)
      at org.eclipse.jetty.util.thread.QueuedThreadPool$3.run(
      QueuedThreadPool.java:539)
      at java.lang.Thread.run(Unknown Source)
      Caused by: org.openrdf.query.MalformedQueryException: Lexical error at
      line 1, column 8. Encountered: "\" (92), after : ""
      at com.bigdata.rdf.sail.sparql.Bigdata2ASTSPARQLParser.parseUpdate2(
      Bigdata2ASTSPARQLParser.java:307)
      at com.bigdata.rdf.sail.webapp.QueryServlet$SparqlUpdateTask.
      call(QueryServlet.java:521)
      at com.bigdata.rdf.sail.webapp.QueryServlet$SparqlUpdateTask.
      call(QueryServlet.java:460)
      at com.bigdata.rdf.task.ApiTaskForIndexManager.call(
      ApiTaskForIndexManager.java:68)
      at java.util.concurrent.FutureTask.run(Unknown Source)
      at java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
      at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
      ... 1 more
      Caused by: com.bigdata.rdf.sail.sparql.ast.TokenMgrError: Lexical error
      at line 1, column 8. Encountered: "\" (92), after : ""
      at com.bigdata.rdf.sail.sparql.ast.SyntaxTreeBuilderTokenManager.
      getNextToken(SyntaxTreeBuilderTokenManager.java:3994)
      at com.bigdata.rdf.sail.sparql.ast.SyntaxTreeBuilder.jj_ntk(
      SyntaxTreeBuilder.java:9633)
      at com.bigdata.rdf.sail.sparql.ast.SyntaxTreeBuilder.Load(
      SyntaxTreeBuilder.java:8020)
      at com.bigdata.rdf.sail.sparql.ast.SyntaxTreeBuilder.Update(
      SyntaxTreeBuilder.java:7867)
      at com.bigdata.rdf.sail.sparql.ast.SyntaxTreeBuilder.UpdateContainer(
      SyntaxTreeBuilder.java:174)
      at com.bigdata.rdf.sail.sparql.ast.SyntaxTreeBuilder.UpdateSequence(
      SyntaxTreeBuilder.java:116)
      at com.bigdata.rdf.sail.sparql.ast.SyntaxTreeBuilder.parseUpdateSequence(
      SyntaxTreeBuilder.java:49)
      at com.bigdata.rdf.sail.sparql.Bigdata2ASTSPARQLParser.parseUpdate2(
      Bigdata2ASTSPARQLParser.java:185)
      ... 7 more

      Query: load C:\Users\a571410\Desktop\schema.nt

      Can someone help guide on how to progress further? I could find any
      solutions on google for this specific problem


      Lexical error at line 1, column 8 while trying to load data from python
      https://sourceforge.net/p/bigdata/discussion/676946/thread/4dafdfe6/?limit=25#e327


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