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#31 Error.Error ... in sendsketch output

1.0
open
nobody
None
2020-02-19
2020-02-18
No

I used sendsketch protein format=3
with a tranlated sketch.

I got some weird result back.

I don't know it it's due to the fact that I use bbmap 38.76

#Query  Ref     ANI     QSize   RefSize QBases  RBases  QTaxID  RTaxID  KID     WKID    SSU
Error.Error.Error.Error.Error.MAG17403.fasta    Muribaculaceae bacterium Isolate-113 (HZI)      97.979  907916  929874  938328  978778  -1      2486474 79.176  81.148  72.658
MAG17403.fasta  Muribaculaceae bacterium Isolate-114 (HZI)      97.977  907916  955327  938328  1000967 -1      2486475 77.208  81.101  72.677
MAG
MAG26934.fasta  Helicobacter mesocricetorum     90.310  518868  512617  542027  546331  -1      87012   33.938  34.789  .
Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.Error.

log:

Adding /srv/beegfs/scratch/users/k/kiesers/Atlas/databases/conda_envs/3b6648f3/opt/bbmap-38.75-0/resources/blacklist_prokprot_merged.sketch to blacklist.
0.419 seconds.
Loaded 31696 sketches in 24.492 seconds.
Total Time:     3301.897 seconds.

Discussion

  • Silas Kieser

    Silas Kieser - 2020-02-19

    So no, updating the version doesn't change the problem

     
  • Silas Kieser

    Silas Kieser - 2020-02-19

    OK, rebuilding the sketch with the newest version solved theproblem.

    Ticked can be closed.

     

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