APL@Voro

APL@Voro is a program designed to aid in the analysis of lipid bilayer simulations carried out by gromacs. It calculates the area per lipid and the membrane thickness even for mixed bilayers. Colored Voronoi diagrams and different types of plots are presented in an interactive environment.

Features

Reading .pdb and .trr/xtc files creatd for lipid bilayers
Calculating Voronoi diagrams for different atom selections
Calculate the area per lipid and membrane thickness
Access bilayer features for single lipids
Generate 2D and 3D plots

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License

Creative Commons Attribution ShareAlike License V3.0

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Additional Project Details

Operating Systems

BSD, Linux

Intended Audience

Education, Science/Research

User Interface

Programming Language

C++

Related Categories

C++ Molecular Mechanics Software

Registered

2012-08-27

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